Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav6-3Q5R1E6 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trav6-3Q5R1E6 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-3Q5R1E6 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-3Q5R1E6 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC15.16■□□□□ 0.02
Trav6-3Q5R1E6 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC15.16■□□□□ 0.02
Trav6-3Q5R1E6 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-3Q5R1E6 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trav6-3Q5R1E6 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Trav6-3Q5R1E6 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-3Q5R1E6 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-3Q5R1E6 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-3Q5R1E6 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trav6-3Q5R1E6 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-3Q5R1E6 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav6-3Q5R1E6 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-3Q5R1E6 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav6-3Q5R1E6 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-3Q5R1E6 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-3Q5R1E6 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-3Q5R1E6 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Trav6-3Q5R1E6 Gm11421-201ENSMUST00000122124 294 ntBASIC15.15■□□□□ 0.02
Trav6-3Q5R1E6 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC15.15■□□□□ 0.02
Trav6-3Q5R1E6 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-3Q5R1E6 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-3Q5R1E6 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-3Q5R1E6 Gm13241-201ENSMUST00000094493 780 ntBASIC15.15■□□□□ 0.02
Trav6-3Q5R1E6 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-3Q5R1E6 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trav6-3Q5R1E6 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-3Q5R1E6 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-3Q5R1E6 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-3Q5R1E6 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-3Q5R1E6 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-3Q5R1E6 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-3Q5R1E6 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-3Q5R1E6 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-3Q5R1E6 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-3Q5R1E6 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-3Q5R1E6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-3Q5R1E6 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-3Q5R1E6 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-3Q5R1E6 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-3Q5R1E6 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-3Q5R1E6 Smad6-203ENSMUST00000179458 273 ntBASIC15.14■□□□□ 0.01
Trav6-3Q5R1E6 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-3Q5R1E6 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trav6-3Q5R1E6 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-3Q5R1E6 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-3Q5R1E6 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-3Q5R1E6 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-3Q5R1E6 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-3Q5R1E6 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-3Q5R1E6 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-3Q5R1E6 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-3Q5R1E6 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-3Q5R1E6 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-3Q5R1E6 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Trav6-3Q5R1E6 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-3Q5R1E6 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-3Q5R1E6 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-3Q5R1E6 Gm7860-201ENSMUST00000121190 879 ntBASIC15.13■□□□□ 0.01
Trav6-3Q5R1E6 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav6-3Q5R1E6 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-3Q5R1E6 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-3Q5R1E6 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-3Q5R1E6 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-3Q5R1E6 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-3Q5R1E6 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-3Q5R1E6 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav6-3Q5R1E6 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
Trav6-3Q5R1E6 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trav6-3Q5R1E6 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-3Q5R1E6 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-3Q5R1E6 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-3Q5R1E6 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-3Q5R1E6 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-3Q5R1E6 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-3Q5R1E6 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-3Q5R1E6 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.12■□□□□ 0.01
Trav6-3Q5R1E6 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-3Q5R1E6 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-3Q5R1E6 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-3Q5R1E6 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Trav6-3Q5R1E6 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trav6-3Q5R1E6 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-3Q5R1E6 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC15.12■□□□□ 0.01
Trav6-3Q5R1E6 Wdr70-203ENSMUST00000227371 1130 ntBASIC15.12■□□□□ 0.01
Trav6-3Q5R1E6 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC15.12■□□□□ 0.01
Trav6-3Q5R1E6 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-3Q5R1E6 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav6-3Q5R1E6 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-3Q5R1E6 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav6-3Q5R1E6 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.12■□□□□ 0.01
Trav6-3Q5R1E6 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav6-3Q5R1E6 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-3Q5R1E6 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav6-3Q5R1E6 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-3Q5R1E6 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-3Q5R1E6 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms