Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.2■□□□□ 0.5
Clhc1Q5M6W3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.2■□□□□ 0.5
Clhc1Q5M6W3 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clhc1Q5M6W3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clhc1Q5M6W3 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.2■□□□□ 0.5
Clhc1Q5M6W3 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clhc1Q5M6W3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clhc1Q5M6W3 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clhc1Q5M6W3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.2■□□□□ 0.5
Clhc1Q5M6W3 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clhc1Q5M6W3 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clhc1Q5M6W3 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.19■□□□□ 0.5
Clhc1Q5M6W3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.19■□□□□ 0.5
Clhc1Q5M6W3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clhc1Q5M6W3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clhc1Q5M6W3 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clhc1Q5M6W3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clhc1Q5M6W3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clhc1Q5M6W3 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clhc1Q5M6W3 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clhc1Q5M6W3 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Clhc1Q5M6W3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.19■□□□□ 0.5
Clhc1Q5M6W3 Golgb1-201ENSMUST00000023534 498 ntBASIC18.19■□□□□ 0.5
Clhc1Q5M6W3 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clhc1Q5M6W3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.19■□□□□ 0.5
Clhc1Q5M6W3 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clhc1Q5M6W3 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clhc1Q5M6W3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clhc1Q5M6W3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clhc1Q5M6W3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clhc1Q5M6W3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clhc1Q5M6W3 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Clhc1Q5M6W3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clhc1Q5M6W3 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clhc1Q5M6W3 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Clhc1Q5M6W3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clhc1Q5M6W3 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.18■□□□□ 0.5
Clhc1Q5M6W3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clhc1Q5M6W3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clhc1Q5M6W3 Gm9847-201ENSMUST00000052528 599 ntBASIC18.18■□□□□ 0.5
Clhc1Q5M6W3 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clhc1Q5M6W3 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Clhc1Q5M6W3 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clhc1Q5M6W3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clhc1Q5M6W3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Clhc1Q5M6W3 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clhc1Q5M6W3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Clhc1Q5M6W3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.17■□□□□ 0.5
Clhc1Q5M6W3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Clhc1Q5M6W3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Clhc1Q5M6W3 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clhc1Q5M6W3 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clhc1Q5M6W3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Clhc1Q5M6W3 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Clhc1Q5M6W3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clhc1Q5M6W3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.17■□□□□ 0.5
Clhc1Q5M6W3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Clhc1Q5M6W3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.17■□□□□ 0.5
Clhc1Q5M6W3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clhc1Q5M6W3 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clhc1Q5M6W3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.17■□□□□ 0.5
Clhc1Q5M6W3 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Clhc1Q5M6W3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Clhc1Q5M6W3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Clhc1Q5M6W3 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.16■□□□□ 0.5
Clhc1Q5M6W3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clhc1Q5M6W3 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clhc1Q5M6W3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clhc1Q5M6W3 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.16■□□□□ 0.5
Clhc1Q5M6W3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
Clhc1Q5M6W3 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clhc1Q5M6W3 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clhc1Q5M6W3 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Clhc1Q5M6W3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.15■□□□□ 0.5
Clhc1Q5M6W3 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Clhc1Q5M6W3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clhc1Q5M6W3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Clhc1Q5M6W3 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clhc1Q5M6W3 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clhc1Q5M6W3 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clhc1Q5M6W3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clhc1Q5M6W3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clhc1Q5M6W3 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clhc1Q5M6W3 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Clhc1Q5M6W3 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Clhc1Q5M6W3 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clhc1Q5M6W3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.5
Clhc1Q5M6W3 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.14■□□□□ 0.5
Clhc1Q5M6W3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Clhc1Q5M6W3 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.14■□□□□ 0.5
Clhc1Q5M6W3 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clhc1Q5M6W3 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Clhc1Q5M6W3 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Clhc1Q5M6W3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Clhc1Q5M6W3 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Clhc1Q5M6W3 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Clhc1Q5M6W3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clhc1Q5M6W3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clhc1Q5M6W3 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.13■□□□□ 0.49
Clhc1Q5M6W3 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms