Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Naf1Q3UMQ8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Naf1Q3UMQ8 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.2■□□□□ 0.66
Naf1Q3UMQ8 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Naf1Q3UMQ8 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.2■□□□□ 0.66
Naf1Q3UMQ8 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Naf1Q3UMQ8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Naf1Q3UMQ8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Naf1Q3UMQ8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.2■□□□□ 0.66
Naf1Q3UMQ8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Naf1Q3UMQ8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Naf1Q3UMQ8 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Naf1Q3UMQ8 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Naf1Q3UMQ8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Naf1Q3UMQ8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Naf1Q3UMQ8 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Naf1Q3UMQ8 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Naf1Q3UMQ8 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Naf1Q3UMQ8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Naf1Q3UMQ8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.19■□□□□ 0.66
Naf1Q3UMQ8 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Naf1Q3UMQ8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Naf1Q3UMQ8 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Naf1Q3UMQ8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Naf1Q3UMQ8 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
Naf1Q3UMQ8 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Naf1Q3UMQ8 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Naf1Q3UMQ8 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.18■□□□□ 0.66
Naf1Q3UMQ8 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Naf1Q3UMQ8 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Naf1Q3UMQ8 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Naf1Q3UMQ8 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.18■□□□□ 0.66
Naf1Q3UMQ8 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Naf1Q3UMQ8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Naf1Q3UMQ8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Naf1Q3UMQ8 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Naf1Q3UMQ8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Naf1Q3UMQ8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Naf1Q3UMQ8 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Naf1Q3UMQ8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Naf1Q3UMQ8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Naf1Q3UMQ8 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Naf1Q3UMQ8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Naf1Q3UMQ8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Naf1Q3UMQ8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Naf1Q3UMQ8 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.17■□□□□ 0.66
Naf1Q3UMQ8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Naf1Q3UMQ8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Naf1Q3UMQ8 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Naf1Q3UMQ8 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.17■□□□□ 0.66
Naf1Q3UMQ8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Naf1Q3UMQ8 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Naf1Q3UMQ8 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Naf1Q3UMQ8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Naf1Q3UMQ8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Naf1Q3UMQ8 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Naf1Q3UMQ8 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Naf1Q3UMQ8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Naf1Q3UMQ8 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Naf1Q3UMQ8 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Naf1Q3UMQ8 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Naf1Q3UMQ8 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Naf1Q3UMQ8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Naf1Q3UMQ8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Naf1Q3UMQ8 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Naf1Q3UMQ8 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Naf1Q3UMQ8 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Naf1Q3UMQ8 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Naf1Q3UMQ8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Naf1Q3UMQ8 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Naf1Q3UMQ8 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Naf1Q3UMQ8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Naf1Q3UMQ8 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Naf1Q3UMQ8 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Naf1Q3UMQ8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.14■□□□□ 0.65
Naf1Q3UMQ8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Naf1Q3UMQ8 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Naf1Q3UMQ8 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.14■□□□□ 0.65
Naf1Q3UMQ8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Naf1Q3UMQ8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.14■□□□□ 0.65
Naf1Q3UMQ8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Naf1Q3UMQ8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Naf1Q3UMQ8 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Naf1Q3UMQ8 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Naf1Q3UMQ8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Naf1Q3UMQ8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Naf1Q3UMQ8 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
Naf1Q3UMQ8 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Naf1Q3UMQ8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Naf1Q3UMQ8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Naf1Q3UMQ8 Gm5408-201ENSMUST00000197998 747 ntBASIC19.13■□□□□ 0.65
Naf1Q3UMQ8 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Naf1Q3UMQ8 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Naf1Q3UMQ8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Naf1Q3UMQ8 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Naf1Q3UMQ8 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Naf1Q3UMQ8 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Naf1Q3UMQ8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Naf1Q3UMQ8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Naf1Q3UMQ8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms