Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Cln6Q3U466 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cln6Q3U466 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cln6Q3U466 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cln6Q3U466 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Cln6Q3U466 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cln6Q3U466 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cln6Q3U466 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Cln6Q3U466 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.05■□□□□ 0.16
Cln6Q3U466 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cln6Q3U466 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cln6Q3U466 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cln6Q3U466 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Cln6Q3U466 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cln6Q3U466 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cln6Q3U466 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cln6Q3U466 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cln6Q3U466 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.04■□□□□ 0.16
Cln6Q3U466 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.04■□□□□ 0.16
Cln6Q3U466 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.04■□□□□ 0.16
Cln6Q3U466 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cln6Q3U466 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cln6Q3U466 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cln6Q3U466 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cln6Q3U466 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cln6Q3U466 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.04■□□□□ 0.16
Cln6Q3U466 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cln6Q3U466 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.04■□□□□ 0.16
Cln6Q3U466 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cln6Q3U466 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cln6Q3U466 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cln6Q3U466 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cln6Q3U466 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cln6Q3U466 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cln6Q3U466 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cln6Q3U466 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.03■□□□□ 0.16
Cln6Q3U466 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Cln6Q3U466 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cln6Q3U466 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cln6Q3U466 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cln6Q3U466 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.03■□□□□ 0.16
Cln6Q3U466 Rps24-207ENSMUST00000224568 714 ntBASIC16.03■□□□□ 0.16
Cln6Q3U466 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cln6Q3U466 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cln6Q3U466 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Cln6Q3U466 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
Cln6Q3U466 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cln6Q3U466 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cln6Q3U466 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cln6Q3U466 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Cln6Q3U466 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cln6Q3U466 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cln6Q3U466 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cln6Q3U466 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Cln6Q3U466 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cln6Q3U466 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Cln6Q3U466 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cln6Q3U466 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cln6Q3U466 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cln6Q3U466 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cln6Q3U466 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.02■□□□□ 0.16
Cln6Q3U466 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cln6Q3U466 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cln6Q3U466 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cln6Q3U466 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cln6Q3U466 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cln6Q3U466 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Cln6Q3U466 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cln6Q3U466 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Cln6Q3U466 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cln6Q3U466 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cln6Q3U466 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cln6Q3U466 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Cln6Q3U466 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cln6Q3U466 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cln6Q3U466 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cln6Q3U466 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Cln6Q3U466 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cln6Q3U466 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Cln6Q3U466 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Cln6Q3U466 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cln6Q3U466 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.01■□□□□ 0.15
Cln6Q3U466 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Cln6Q3U466 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cln6Q3U466 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.01■□□□□ 0.15
Cln6Q3U466 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Cln6Q3U466 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cln6Q3U466 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cln6Q3U466 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Cln6Q3U466 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16■□□□□ 0.15
Cln6Q3U466 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16■□□□□ 0.15
Cln6Q3U466 Gm14117-201ENSMUST00000122417 843 ntBASIC16■□□□□ 0.15
Cln6Q3U466 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16■□□□□ 0.15
Cln6Q3U466 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16■□□□□ 0.15
Cln6Q3U466 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Cln6Q3U466 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16■□□□□ 0.15
Cln6Q3U466 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16■□□□□ 0.15
Cln6Q3U466 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
Cln6Q3U466 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cln6Q3U466 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms