Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Trim72Q1XH17 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.16■□□□□ 0.82
Trim72Q1XH17 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim72Q1XH17 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim72Q1XH17 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim72Q1XH17 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim72Q1XH17 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.15■□□□□ 0.82
Trim72Q1XH17 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.15■□□□□ 0.82
Trim72Q1XH17 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim72Q1XH17 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Trim72Q1XH17 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.15■□□□□ 0.82
Trim72Q1XH17 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trim72Q1XH17 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim72Q1XH17 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim72Q1XH17 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Trim72Q1XH17 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Trim72Q1XH17 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trim72Q1XH17 Gm13146-201ENSMUST00000118508 780 ntBASIC20.14■□□□□ 0.81
Trim72Q1XH17 Gm13234-201ENSMUST00000120010 747 ntBASIC20.14■□□□□ 0.81
Trim72Q1XH17 BC021767-201ENSMUST00000126387 1716 ntBASIC20.13■□□□□ 0.81
Trim72Q1XH17 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim72Q1XH17 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim72Q1XH17 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.13■□□□□ 0.81
Trim72Q1XH17 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.13■□□□□ 0.81
Trim72Q1XH17 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim72Q1XH17 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.13■□□□□ 0.81
Trim72Q1XH17 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.13■□□□□ 0.81
Trim72Q1XH17 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.13■□□□□ 0.81
Trim72Q1XH17 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim72Q1XH17 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Trim72Q1XH17 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Trim72Q1XH17 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim72Q1XH17 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Trim72Q1XH17 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim72Q1XH17 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim72Q1XH17 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim72Q1XH17 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim72Q1XH17 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim72Q1XH17 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Trim72Q1XH17 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim72Q1XH17 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Trim72Q1XH17 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim72Q1XH17 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.12■□□□□ 0.81
Trim72Q1XH17 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim72Q1XH17 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim72Q1XH17 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim72Q1XH17 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim72Q1XH17 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim72Q1XH17 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim72Q1XH17 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim72Q1XH17 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
Trim72Q1XH17 Gm42778-201ENSMUST00000199644 553 ntBASIC20.11■□□□□ 0.81
Trim72Q1XH17 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.11■□□□□ 0.81
Trim72Q1XH17 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
Trim72Q1XH17 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim72Q1XH17 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim72Q1XH17 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim72Q1XH17 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim72Q1XH17 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.11■□□□□ 0.81
Trim72Q1XH17 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim72Q1XH17 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim72Q1XH17 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.1■□□□□ 0.81
Trim72Q1XH17 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Trim72Q1XH17 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.1■□□□□ 0.81
Trim72Q1XH17 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.1■□□□□ 0.81
Trim72Q1XH17 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trim72Q1XH17 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim72Q1XH17 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Trim72Q1XH17 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim72Q1XH17 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim72Q1XH17 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim72Q1XH17 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim72Q1XH17 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trim72Q1XH17 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim72Q1XH17 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.09■□□□□ 0.81
Trim72Q1XH17 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trim72Q1XH17 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim72Q1XH17 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim72Q1XH17 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim72Q1XH17 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim72Q1XH17 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim72Q1XH17 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim72Q1XH17 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.08■□□□□ 0.81
Trim72Q1XH17 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim72Q1XH17 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Trim72Q1XH17 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim72Q1XH17 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim72Q1XH17 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trim72Q1XH17 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim72Q1XH17 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Trim72Q1XH17 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.08■□□□□ 0.81
Trim72Q1XH17 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.08■□□□□ 0.81
Trim72Q1XH17 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Trim72Q1XH17 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim72Q1XH17 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Trim72Q1XH17 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Trim72Q1XH17 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.08■□□□□ 0.8
Trim72Q1XH17 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim72Q1XH17 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim72Q1XH17 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms