Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Col19a1Q0VF58 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Col19a1Q0VF58 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.36■□□□□ 0.85
Col19a1Q0VF58 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.36■□□□□ 0.85
Col19a1Q0VF58 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.36■□□□□ 0.85
Col19a1Q0VF58 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col19a1Q0VF58 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Col19a1Q0VF58 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col19a1Q0VF58 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col19a1Q0VF58 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col19a1Q0VF58 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Col19a1Q0VF58 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col19a1Q0VF58 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Col19a1Q0VF58 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col19a1Q0VF58 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.35■□□□□ 0.85
Col19a1Q0VF58 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Col19a1Q0VF58 Gm11927-201ENSMUST00000118472 759 ntBASIC20.35■□□□□ 0.85
Col19a1Q0VF58 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Col19a1Q0VF58 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Col19a1Q0VF58 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col19a1Q0VF58 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.35■□□□□ 0.85
Col19a1Q0VF58 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Col19a1Q0VF58 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col19a1Q0VF58 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Col19a1Q0VF58 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
Col19a1Q0VF58 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col19a1Q0VF58 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Col19a1Q0VF58 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Col19a1Q0VF58 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col19a1Q0VF58 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC20.33■□□□□ 0.85
Col19a1Q0VF58 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col19a1Q0VF58 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col19a1Q0VF58 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col19a1Q0VF58 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.33■□□□□ 0.85
Col19a1Q0VF58 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col19a1Q0VF58 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Col19a1Q0VF58 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Col19a1Q0VF58 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Col19a1Q0VF58 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Col19a1Q0VF58 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col19a1Q0VF58 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col19a1Q0VF58 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Col19a1Q0VF58 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Col19a1Q0VF58 Gm43183-201ENSMUST00000200632 547 ntBASIC20.32■□□□□ 0.84
Col19a1Q0VF58 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Col19a1Q0VF58 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col19a1Q0VF58 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col19a1Q0VF58 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col19a1Q0VF58 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Col19a1Q0VF58 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col19a1Q0VF58 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col19a1Q0VF58 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col19a1Q0VF58 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col19a1Q0VF58 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Col19a1Q0VF58 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col19a1Q0VF58 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col19a1Q0VF58 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC20.31■□□□□ 0.84
Col19a1Q0VF58 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Col19a1Q0VF58 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Col19a1Q0VF58 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col19a1Q0VF58 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col19a1Q0VF58 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col19a1Q0VF58 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col19a1Q0VF58 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col19a1Q0VF58 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col19a1Q0VF58 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Col19a1Q0VF58 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Col19a1Q0VF58 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col19a1Q0VF58 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.31■□□□□ 0.84
Col19a1Q0VF58 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col19a1Q0VF58 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col19a1Q0VF58 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Col19a1Q0VF58 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Col19a1Q0VF58 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col19a1Q0VF58 Gm23634-201ENSMUST00000175071 91 ntBASIC20.3■□□□□ 0.84
Col19a1Q0VF58 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Col19a1Q0VF58 Gm18101-201ENSMUST00000215769 548 ntBASIC20.3■□□□□ 0.84
Col19a1Q0VF58 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Col19a1Q0VF58 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col19a1Q0VF58 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col19a1Q0VF58 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col19a1Q0VF58 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col19a1Q0VF58 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col19a1Q0VF58 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col19a1Q0VF58 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Col19a1Q0VF58 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Col19a1Q0VF58 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col19a1Q0VF58 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.29■□□□□ 0.84
Col19a1Q0VF58 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.29■□□□□ 0.84
Col19a1Q0VF58 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.29■□□□□ 0.84
Col19a1Q0VF58 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Col19a1Q0VF58 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Col19a1Q0VF58 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col19a1Q0VF58 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col19a1Q0VF58 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col19a1Q0VF58 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col19a1Q0VF58 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col19a1Q0VF58 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col19a1Q0VF58 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col19a1Q0VF58 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms