Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd8Q09XV5 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd8Q09XV5 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd8Q09XV5 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd8Q09XV5 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Chd8Q09XV5 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Chd8Q09XV5 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Chd8Q09XV5 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd8Q09XV5 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Chd8Q09XV5 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd8Q09XV5 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd8Q09XV5 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Chd8Q09XV5 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd8Q09XV5 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.09■□□□□ 0.33
Chd8Q09XV5 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chd8Q09XV5 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Chd8Q09XV5 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd8Q09XV5 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.09■□□□□ 0.33
Chd8Q09XV5 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd8Q09XV5 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd8Q09XV5 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chd8Q09XV5 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd8Q09XV5 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd8Q09XV5 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd8Q09XV5 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Chd8Q09XV5 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.08■□□□□ 0.33
Chd8Q09XV5 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Chd8Q09XV5 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.08■□□□□ 0.33
Chd8Q09XV5 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chd8Q09XV5 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chd8Q09XV5 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Chd8Q09XV5 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chd8Q09XV5 Gm3375-201ENSMUST00000203929 796 ntBASIC17.08■□□□□ 0.32
Chd8Q09XV5 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.08■□□□□ 0.32
Chd8Q09XV5 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.08■□□□□ 0.32
Chd8Q09XV5 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Chd8Q09XV5 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.08■□□□□ 0.32
Chd8Q09XV5 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd8Q09XV5 Gm34391-201ENSMUST00000203706 907 ntBASIC17.07■□□□□ 0.32
Chd8Q09XV5 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chd8Q09XV5 Birc2-201ENSMUST00000054878 378 ntBASIC17.07■□□□□ 0.32
Chd8Q09XV5 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Chd8Q09XV5 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd8Q09XV5 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd8Q09XV5 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chd8Q09XV5 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Chd8Q09XV5 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.07■□□□□ 0.32
Chd8Q09XV5 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.07■□□□□ 0.32
Chd8Q09XV5 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Chd8Q09XV5 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd8Q09XV5 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd8Q09XV5 Gm38285-201ENSMUST00000192928 922 ntBASIC17.06■□□□□ 0.32
Chd8Q09XV5 Gm5587-201ENSMUST00000206270 674 ntBASIC17.06■□□□□ 0.32
Chd8Q09XV5 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd8Q09XV5 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd8Q09XV5 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.06■□□□□ 0.32
Chd8Q09XV5 Auts2-212ENSMUST00000178555 309 ntBASIC17.06■□□□□ 0.32
Chd8Q09XV5 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.06■□□□□ 0.32
Chd8Q09XV5 Gm7791-201ENSMUST00000219066 539 ntBASIC17.06■□□□□ 0.32
Chd8Q09XV5 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd8Q09XV5 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chd8Q09XV5 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chd8Q09XV5 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.05■□□□□ 0.32
Chd8Q09XV5 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chd8Q09XV5 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Chd8Q09XV5 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chd8Q09XV5 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.05■□□□□ 0.32
Chd8Q09XV5 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chd8Q09XV5 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.05■□□□□ 0.32
Chd8Q09XV5 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chd8Q09XV5 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chd8Q09XV5 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chd8Q09XV5 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chd8Q09XV5 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Chd8Q09XV5 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chd8Q09XV5 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chd8Q09XV5 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chd8Q09XV5 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chd8Q09XV5 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chd8Q09XV5 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chd8Q09XV5 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chd8Q09XV5 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chd8Q09XV5 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chd8Q09XV5 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chd8Q09XV5 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chd8Q09XV5 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.04■□□□□ 0.32
Chd8Q09XV5 Mir8098-201ENSMUST00000184011 137 ntBASIC17.04■□□□□ 0.32
Chd8Q09XV5 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chd8Q09XV5 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chd8Q09XV5 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chd8Q09XV5 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chd8Q09XV5 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.03■□□□□ 0.32
Chd8Q09XV5 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chd8Q09XV5 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Chd8Q09XV5 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chd8Q09XV5 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chd8Q09XV5 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chd8Q09XV5 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Chd8Q09XV5 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.03■□□□□ 0.32
Chd8Q09XV5 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms