Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim43cP86449 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim43cP86449 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim43cP86449 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim43cP86449 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim43cP86449 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim43cP86449 Gm13534-201ENSMUST00000121169 513 ntBASIC20.61■□□□□ 0.89
Trim43cP86449 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.61■□□□□ 0.89
Trim43cP86449 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim43cP86449 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.61■□□□□ 0.89
Trim43cP86449 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Trim43cP86449 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim43cP86449 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim43cP86449 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim43cP86449 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim43cP86449 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim43cP86449 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim43cP86449 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim43cP86449 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim43cP86449 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.6■□□□□ 0.89
Trim43cP86449 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Trim43cP86449 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim43cP86449 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.6■□□□□ 0.89
Trim43cP86449 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim43cP86449 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.6■□□□□ 0.89
Trim43cP86449 Gm13234-201ENSMUST00000120010 747 ntBASIC20.6■□□□□ 0.89
Trim43cP86449 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim43cP86449 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim43cP86449 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim43cP86449 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim43cP86449 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim43cP86449 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim43cP86449 Gm9988-201ENSMUST00000069786 435 ntBASIC20.6■□□□□ 0.89
Trim43cP86449 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Trim43cP86449 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim43cP86449 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim43cP86449 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim43cP86449 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim43cP86449 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim43cP86449 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Trim43cP86449 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim43cP86449 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim43cP86449 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim43cP86449 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.59■□□□□ 0.89
Trim43cP86449 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim43cP86449 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Trim43cP86449 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim43cP86449 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Trim43cP86449 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.59■□□□□ 0.89
Trim43cP86449 Gm10033-202ENSMUST00000211874 928 ntBASIC20.59■□□□□ 0.89
Trim43cP86449 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim43cP86449 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Trim43cP86449 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim43cP86449 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim43cP86449 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim43cP86449 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim43cP86449 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Trim43cP86449 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim43cP86449 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim43cP86449 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim43cP86449 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trim43cP86449 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim43cP86449 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Trim43cP86449 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.58■□□□□ 0.89
Trim43cP86449 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim43cP86449 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim43cP86449 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Trim43cP86449 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Trim43cP86449 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim43cP86449 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim43cP86449 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim43cP86449 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim43cP86449 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trim43cP86449 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim43cP86449 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim43cP86449 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim43cP86449 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim43cP86449 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim43cP86449 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim43cP86449 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.56■□□□□ 0.88
Trim43cP86449 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim43cP86449 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim43cP86449 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim43cP86449 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.56■□□□□ 0.88
Trim43cP86449 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim43cP86449 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.56■□□□□ 0.88
Trim43cP86449 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.56■□□□□ 0.88
Trim43cP86449 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.56■□□□□ 0.88
Trim43cP86449 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim43cP86449 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim43cP86449 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.56■□□□□ 0.88
Trim43cP86449 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Trim43cP86449 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim43cP86449 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.55■□□□□ 0.88
Trim43cP86449 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim43cP86449 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.55■□□□□ 0.88
Trim43cP86449 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.55■□□□□ 0.88
Trim43cP86449 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.55■□□□□ 0.88
Trim43cP86449 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim43cP86449 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms