Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SgcaP82350 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SgcaP82350 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SgcaP82350 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.81■□□□□ 0.12
SgcaP82350 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SgcaP82350 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SgcaP82350 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SgcaP82350 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SgcaP82350 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SgcaP82350 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SgcaP82350 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SgcaP82350 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SgcaP82350 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SgcaP82350 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SgcaP82350 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SgcaP82350 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SgcaP82350 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SgcaP82350 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SgcaP82350 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SgcaP82350 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SgcaP82350 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SgcaP82350 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC15.8■□□□□ 0.12
SgcaP82350 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SgcaP82350 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SgcaP82350 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SgcaP82350 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SgcaP82350 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SgcaP82350 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SgcaP82350 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.8■□□□□ 0.12
SgcaP82350 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SgcaP82350 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SgcaP82350 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SgcaP82350 AA386476-201ENSMUST00000098781 1665 ntBASIC15.79■□□□□ 0.12
SgcaP82350 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SgcaP82350 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
SgcaP82350 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SgcaP82350 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC15.79■□□□□ 0.12
SgcaP82350 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SgcaP82350 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SgcaP82350 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SgcaP82350 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SgcaP82350 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SgcaP82350 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SgcaP82350 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SgcaP82350 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SgcaP82350 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
SgcaP82350 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SgcaP82350 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SgcaP82350 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SgcaP82350 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SgcaP82350 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SgcaP82350 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SgcaP82350 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SgcaP82350 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SgcaP82350 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SgcaP82350 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SgcaP82350 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
SgcaP82350 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SgcaP82350 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SgcaP82350 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SgcaP82350 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SgcaP82350 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SgcaP82350 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
SgcaP82350 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SgcaP82350 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SgcaP82350 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC15.77■□□□□ 0.12
SgcaP82350 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
SgcaP82350 Gm43530-201ENSMUST00000195920 274 ntBASIC15.77■□□□□ 0.12
SgcaP82350 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
SgcaP82350 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SgcaP82350 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SgcaP82350 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SgcaP82350 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SgcaP82350 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SgcaP82350 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SgcaP82350 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SgcaP82350 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SgcaP82350 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SgcaP82350 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SgcaP82350 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SgcaP82350 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SgcaP82350 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SgcaP82350 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SgcaP82350 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC15.76■□□□□ 0.11
SgcaP82350 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC15.76■□□□□ 0.11
SgcaP82350 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.76■□□□□ 0.11
SgcaP82350 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SgcaP82350 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SgcaP82350 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SgcaP82350 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.76■□□□□ 0.11
SgcaP82350 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SgcaP82350 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SgcaP82350 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
SgcaP82350 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SgcaP82350 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
SgcaP82350 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
SgcaP82350 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SgcaP82350 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.75■□□□□ 0.11
SgcaP82350 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
SgcaP82350 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms