Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CiitaP79621 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CiitaP79621 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CiitaP79621 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CiitaP79621 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CiitaP79621 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CiitaP79621 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CiitaP79621 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.54■□□□□ 0.88
CiitaP79621 Golph3-202ENSMUST00000226517 2359 ntBASIC20.54■□□□□ 0.88
CiitaP79621 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CiitaP79621 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CiitaP79621 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CiitaP79621 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CiitaP79621 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CiitaP79621 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CiitaP79621 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CiitaP79621 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CiitaP79621 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CiitaP79621 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
CiitaP79621 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CiitaP79621 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CiitaP79621 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CiitaP79621 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CiitaP79621 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CiitaP79621 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
CiitaP79621 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CiitaP79621 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CiitaP79621 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CiitaP79621 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CiitaP79621 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CiitaP79621 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CiitaP79621 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CiitaP79621 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CiitaP79621 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
CiitaP79621 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CiitaP79621 Notumos-201ENSMUST00000151998 2659 ntBASIC20.52■□□□□ 0.88
CiitaP79621 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CiitaP79621 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CiitaP79621 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CiitaP79621 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CiitaP79621 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CiitaP79621 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CiitaP79621 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CiitaP79621 Gm12441-201ENSMUST00000121806 588 ntBASIC20.51■□□□□ 0.87
CiitaP79621 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CiitaP79621 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CiitaP79621 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.51■□□□□ 0.87
CiitaP79621 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CiitaP79621 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.51■□□□□ 0.87
CiitaP79621 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CiitaP79621 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.51■□□□□ 0.87
CiitaP79621 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CiitaP79621 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CiitaP79621 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CiitaP79621 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CiitaP79621 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CiitaP79621 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CiitaP79621 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.5■□□□□ 0.87
CiitaP79621 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CiitaP79621 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CiitaP79621 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CiitaP79621 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CiitaP79621 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CiitaP79621 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.5■□□□□ 0.87
CiitaP79621 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CiitaP79621 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CiitaP79621 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CiitaP79621 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CiitaP79621 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CiitaP79621 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CiitaP79621 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CiitaP79621 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.49■□□□□ 0.87
CiitaP79621 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CiitaP79621 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
CiitaP79621 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CiitaP79621 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CiitaP79621 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
CiitaP79621 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CiitaP79621 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CiitaP79621 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CiitaP79621 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CiitaP79621 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CiitaP79621 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CiitaP79621 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.48■□□□□ 0.87
CiitaP79621 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CiitaP79621 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CiitaP79621 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CiitaP79621 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
CiitaP79621 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CiitaP79621 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CiitaP79621 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
CiitaP79621 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CiitaP79621 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CiitaP79621 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CiitaP79621 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CiitaP79621 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CiitaP79621 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.47■□□□□ 0.87
CiitaP79621 Gm26524-201ENSMUST00000192339 390 ntBASIC20.47■□□□□ 0.87
CiitaP79621 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.47■□□□□ 0.87
CiitaP79621 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms