Protein–RNA interactions for Protein: P70348

Gcm1, Chorion-specific transcription factor GCMa, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gcm1P70348 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gcm1P70348 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gcm1P70348 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gcm1P70348 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Gcm1P70348 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gcm1P70348 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gcm1P70348 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15.82■□□□□ 0.12
Gcm1P70348 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.82■□□□□ 0.12
Gcm1P70348 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Gcm1P70348 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gcm1P70348 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Gcm1P70348 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Gcm1P70348 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Gcm1P70348 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Gcm1P70348 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gcm1P70348 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gcm1P70348 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Gcm1P70348 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Gcm1P70348 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC15.81■□□□□ 0.12
Gcm1P70348 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Gcm1P70348 Gm5297-201ENSMUST00000198555 1171 ntBASIC15.81■□□□□ 0.12
Gcm1P70348 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gcm1P70348 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.81■□□□□ 0.12
Gcm1P70348 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gcm1P70348 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC15.81■□□□□ 0.12
Gcm1P70348 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gcm1P70348 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gcm1P70348 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Gcm1P70348 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Gcm1P70348 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Gcm1P70348 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gcm1P70348 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gcm1P70348 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Gcm1P70348 Gm13146-201ENSMUST00000118508 780 ntBASIC15.8■□□□□ 0.12
Gcm1P70348 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC15.8■□□□□ 0.12
Gcm1P70348 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.8■□□□□ 0.12
Gcm1P70348 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.8■□□□□ 0.12
Gcm1P70348 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.8■□□□□ 0.12
Gcm1P70348 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gcm1P70348 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gcm1P70348 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gcm1P70348 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Gcm1P70348 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Gcm1P70348 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gcm1P70348 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gcm1P70348 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gcm1P70348 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gcm1P70348 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Gcm1P70348 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Gcm1P70348 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gcm1P70348 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC15.79■□□□□ 0.12
Gcm1P70348 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.79■□□□□ 0.12
Gcm1P70348 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Gcm1P70348 Ap3s1-204ENSMUST00000225520 957 ntBASIC15.79■□□□□ 0.12
Gcm1P70348 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.79■□□□□ 0.12
Gcm1P70348 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gcm1P70348 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gcm1P70348 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.78■□□□□ 0.12
Gcm1P70348 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gcm1P70348 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gcm1P70348 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Gcm1P70348 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Gcm1P70348 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.78■□□□□ 0.12
Gcm1P70348 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Gcm1P70348 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC15.77■□□□□ 0.12
Gcm1P70348 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gcm1P70348 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gcm1P70348 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gcm1P70348 Gm12933-201ENSMUST00000120203 872 ntBASIC15.77■□□□□ 0.12
Gcm1P70348 Gm29257-201ENSMUST00000186115 639 ntBASIC15.77■□□□□ 0.12
Gcm1P70348 Gm38205-201ENSMUST00000192243 258 ntBASIC15.77■□□□□ 0.12
Gcm1P70348 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Gcm1P70348 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15.77■□□□□ 0.12
Gcm1P70348 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gcm1P70348 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gcm1P70348 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Gcm1P70348 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gcm1P70348 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Gcm1P70348 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Gcm1P70348 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Gcm1P70348 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Gcm1P70348 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Gcm1P70348 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Gcm1P70348 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gcm1P70348 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gcm1P70348 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Gcm1P70348 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gcm1P70348 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gcm1P70348 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gcm1P70348 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gcm1P70348 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Gcm1P70348 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Gcm1P70348 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gcm1P70348 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Gcm1P70348 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Gcm1P70348 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gcm1P70348 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Gcm1P70348 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gcm1P70348 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gcm1P70348 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms