Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC31.46■■■□□ 2.63
Cux2P70298 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Cux2P70298 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Cux2P70298 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Cux2P70298 Gm19094-201ENSMUST00000209791 1246 ntBASIC31.46■■■□□ 2.63
Cux2P70298 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Cux2P70298 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC31.46■■■□□ 2.63
Cux2P70298 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Cux2P70298 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Cux2P70298 Gm37035-201ENSMUST00000194809 2148 ntBASIC31.45■■■□□ 2.63
Cux2P70298 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Cux2P70298 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.63
Cux2P70298 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC31.45■■■□□ 2.63
Cux2P70298 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Cux2P70298 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC31.45■■■□□ 2.63
Cux2P70298 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC31.45■■■□□ 2.63
Cux2P70298 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Cux2P70298 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.62
Cux2P70298 Gm32699-201ENSMUST00000221728 1988 ntBASIC31.45■■■□□ 2.62
Cux2P70298 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC31.44■■■□□ 2.62
Cux2P70298 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Cux2P70298 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
Cux2P70298 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Cux2P70298 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC31.44■■■□□ 2.62
Cux2P70298 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
Cux2P70298 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Cux2P70298 Flg-201ENSMUST00000050758 1488 ntBASIC31.43■■■□□ 2.62
Cux2P70298 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
Cux2P70298 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Cux2P70298 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Cux2P70298 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Cux2P70298 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Cux2P70298 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Cux2P70298 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC31.42■■■□□ 2.62
Cux2P70298 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
Cux2P70298 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Cux2P70298 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Cux2P70298 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Cux2P70298 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Cux2P70298 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Cux2P70298 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC31.41■■■□□ 2.62
Cux2P70298 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC31.41■■■□□ 2.62
Cux2P70298 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Cux2P70298 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Cux2P70298 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
Cux2P70298 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Cux2P70298 Gm43183-201ENSMUST00000200632 547 ntBASIC31.41■■■□□ 2.62
Cux2P70298 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC31.4■■■□□ 2.62
Cux2P70298 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
Cux2P70298 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Cux2P70298 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Cux2P70298 Gm3375-201ENSMUST00000203929 796 ntBASIC31.4■■■□□ 2.62
Cux2P70298 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Cux2P70298 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.62
Cux2P70298 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
Cux2P70298 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC31.39■■■□□ 2.62
Cux2P70298 Odf3b-204ENSMUST00000227834 930 ntBASIC31.39■■■□□ 2.62
Cux2P70298 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC31.39■■■□□ 2.61
Cux2P70298 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Cux2P70298 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
Cux2P70298 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC31.38■■■□□ 2.61
Cux2P70298 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Cux2P70298 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Cux2P70298 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC31.38■■■□□ 2.61
Cux2P70298 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC31.38■■■□□ 2.61
Cux2P70298 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC31.38■■■□□ 2.61
Cux2P70298 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Cux2P70298 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Cux2P70298 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Cux2P70298 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Cux2P70298 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
Cux2P70298 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Cux2P70298 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Cux2P70298 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Cux2P70298 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
Cux2P70298 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Cux2P70298 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Cux2P70298 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC31.35■■■□□ 2.61
Cux2P70298 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Cux2P70298 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC31.35■■■□□ 2.61
Cux2P70298 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
Cux2P70298 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
Cux2P70298 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
Cux2P70298 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC31.35■■■□□ 2.61
Cux2P70298 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
Cux2P70298 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Cux2P70298 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Cux2P70298 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC31.34■■■□□ 2.61
Cux2P70298 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Cux2P70298 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
Cux2P70298 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Cux2P70298 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC31.33■■■□□ 2.61
Cux2P70298 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC31.33■■■□□ 2.61
Cux2P70298 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Cux2P70298 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC31.33■■■□□ 2.61
Cux2P70298 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Cux2P70298 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Cux2P70298 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC31.32■■■□□ 2.61
Cux2P70298 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
Cux2P70298 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms