Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp46P62069 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Usp46P62069 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Usp46P62069 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.72■□□□□ 0.75
Usp46P62069 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp46P62069 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.72■□□□□ 0.75
Usp46P62069 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Usp46P62069 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp46P62069 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.72■□□□□ 0.75
Usp46P62069 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp46P62069 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Usp46P62069 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Usp46P62069 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp46P62069 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp46P62069 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Usp46P62069 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.71■□□□□ 0.75
Usp46P62069 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.71■□□□□ 0.75
Usp46P62069 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.71■□□□□ 0.75
Usp46P62069 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp46P62069 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp46P62069 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Usp46P62069 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp46P62069 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp46P62069 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp46P62069 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp46P62069 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp46P62069 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp46P62069 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp46P62069 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Usp46P62069 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.7■□□□□ 0.74
Usp46P62069 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp46P62069 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Usp46P62069 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.7■□□□□ 0.74
Usp46P62069 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp46P62069 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Usp46P62069 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usp46P62069 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp46P62069 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usp46P62069 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Usp46P62069 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp46P62069 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Usp46P62069 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp46P62069 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp46P62069 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp46P62069 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp46P62069 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp46P62069 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Usp46P62069 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Usp46P62069 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp46P62069 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp46P62069 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp46P62069 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp46P62069 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp46P62069 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.68■□□□□ 0.74
Usp46P62069 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp46P62069 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp46P62069 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Usp46P62069 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Usp46P62069 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.68■□□□□ 0.74
Usp46P62069 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Usp46P62069 Gm27011-201ENSMUST00000182352 972 ntBASIC19.68■□□□□ 0.74
Usp46P62069 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp46P62069 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp46P62069 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Usp46P62069 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp46P62069 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp46P62069 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp46P62069 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp46P62069 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.67■□□□□ 0.74
Usp46P62069 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.67■□□□□ 0.74
Usp46P62069 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp46P62069 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Usp46P62069 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp46P62069 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Usp46P62069 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Usp46P62069 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Usp46P62069 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp46P62069 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Usp46P62069 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.67■□□□□ 0.74
Usp46P62069 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp46P62069 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp46P62069 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Usp46P62069 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Usp46P62069 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Usp46P62069 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.67■□□□□ 0.74
Usp46P62069 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp46P62069 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp46P62069 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp46P62069 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp46P62069 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp46P62069 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp46P62069 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
Usp46P62069 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp46P62069 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp46P62069 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp46P62069 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Usp46P62069 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp46P62069 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.66■□□□□ 0.74
Usp46P62069 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.66■□□□□ 0.74
Usp46P62069 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms