Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tubgcp3P58854 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tubgcp3P58854 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tubgcp3P58854 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.27■□□□□ 0.68
Tubgcp3P58854 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Tubgcp3P58854 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tubgcp3P58854 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
Tubgcp3P58854 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tubgcp3P58854 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.27■□□□□ 0.68
Tubgcp3P58854 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.27■□□□□ 0.68
Tubgcp3P58854 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tubgcp3P58854 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tubgcp3P58854 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tubgcp3P58854 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tubgcp3P58854 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Tubgcp3P58854 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tubgcp3P58854 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tubgcp3P58854 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tubgcp3P58854 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tubgcp3P58854 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tubgcp3P58854 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tubgcp3P58854 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tubgcp3P58854 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tubgcp3P58854 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tubgcp3P58854 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tubgcp3P58854 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.26■□□□□ 0.67
Tubgcp3P58854 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tubgcp3P58854 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tubgcp3P58854 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tubgcp3P58854 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Tubgcp3P58854 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.25■□□□□ 0.67
Tubgcp3P58854 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tubgcp3P58854 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubgcp3P58854 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tubgcp3P58854 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubgcp3P58854 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.25■□□□□ 0.67
Tubgcp3P58854 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.25■□□□□ 0.67
Tubgcp3P58854 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Tubgcp3P58854 Gm43060-201ENSMUST00000200621 289 ntBASIC19.25■□□□□ 0.67
Tubgcp3P58854 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubgcp3P58854 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubgcp3P58854 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.25■□□□□ 0.67
Tubgcp3P58854 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.25■□□□□ 0.67
Tubgcp3P58854 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubgcp3P58854 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Tubgcp3P58854 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.25■□□□□ 0.67
Tubgcp3P58854 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Tubgcp3P58854 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tubgcp3P58854 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.24■□□□□ 0.67
Tubgcp3P58854 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tubgcp3P58854 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tubgcp3P58854 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tubgcp3P58854 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tubgcp3P58854 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tubgcp3P58854 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tubgcp3P58854 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tubgcp3P58854 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tubgcp3P58854 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tubgcp3P58854 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tubgcp3P58854 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Tubgcp3P58854 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tubgcp3P58854 Gm7860-201ENSMUST00000121190 879 ntBASIC19.23■□□□□ 0.67
Tubgcp3P58854 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tubgcp3P58854 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tubgcp3P58854 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tubgcp3P58854 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tubgcp3P58854 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Tubgcp3P58854 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tubgcp3P58854 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Tubgcp3P58854 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.22■□□□□ 0.67
Tubgcp3P58854 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tubgcp3P58854 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tubgcp3P58854 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tubgcp3P58854 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tubgcp3P58854 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tubgcp3P58854 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Tubgcp3P58854 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tubgcp3P58854 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Tubgcp3P58854 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tubgcp3P58854 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tubgcp3P58854 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Tubgcp3P58854 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Tubgcp3P58854 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tubgcp3P58854 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Tubgcp3P58854 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Tubgcp3P58854 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.21■□□□□ 0.67
Tubgcp3P58854 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.21■□□□□ 0.67
Tubgcp3P58854 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.21■□□□□ 0.67
Tubgcp3P58854 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tubgcp3P58854 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tubgcp3P58854 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Tubgcp3P58854 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Tubgcp3P58854 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Tubgcp3P58854 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tubgcp3P58854 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tubgcp3P58854 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.2■□□□□ 0.66
Tubgcp3P58854 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tubgcp3P58854 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Tubgcp3P58854 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tubgcp3P58854 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms