Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh11P55288 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh11P55288 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh11P55288 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh11P55288 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cdh11P55288 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh11P55288 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cdh11P55288 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh11P55288 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh11P55288 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Cdh11P55288 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh11P55288 Gm18284-201ENSMUST00000172604 624 ntBASIC17.15■□□□□ 0.34
Cdh11P55288 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh11P55288 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh11P55288 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh11P55288 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh11P55288 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Cdh11P55288 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cdh11P55288 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh11P55288 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh11P55288 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh11P55288 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh11P55288 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh11P55288 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh11P55288 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cdh11P55288 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh11P55288 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh11P55288 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh11P55288 Gm26833-201ENSMUST00000180899 440 ntBASIC17.14■□□□□ 0.33
Cdh11P55288 Gm8495-201ENSMUST00000188740 694 ntBASIC17.14■□□□□ 0.33
Cdh11P55288 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.14■□□□□ 0.33
Cdh11P55288 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.14■□□□□ 0.33
Cdh11P55288 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Cdh11P55288 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh11P55288 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh11P55288 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh11P55288 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh11P55288 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.14■□□□□ 0.33
Cdh11P55288 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Cdh11P55288 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh11P55288 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cdh11P55288 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh11P55288 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh11P55288 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh11P55288 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh11P55288 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cdh11P55288 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cdh11P55288 BC021767-201ENSMUST00000126387 1716 ntBASIC17.13■□□□□ 0.33
Cdh11P55288 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh11P55288 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Cdh11P55288 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh11P55288 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh11P55288 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh11P55288 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.12■□□□□ 0.33
Cdh11P55288 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.12■□□□□ 0.33
Cdh11P55288 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh11P55288 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.12■□□□□ 0.33
Cdh11P55288 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.12■□□□□ 0.33
Cdh11P55288 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.12■□□□□ 0.33
Cdh11P55288 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh11P55288 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Cdh11P55288 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh11P55288 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh11P55288 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cdh11P55288 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh11P55288 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh11P55288 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh11P55288 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh11P55288 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh11P55288 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh11P55288 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.11■□□□□ 0.33
Cdh11P55288 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh11P55288 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.11■□□□□ 0.33
Cdh11P55288 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.11■□□□□ 0.33
Cdh11P55288 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh11P55288 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh11P55288 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.11■□□□□ 0.33
Cdh11P55288 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh11P55288 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
Cdh11P55288 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh11P55288 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh11P55288 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Cdh11P55288 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.1■□□□□ 0.33
Cdh11P55288 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.1■□□□□ 0.33
Cdh11P55288 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh11P55288 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.1■□□□□ 0.33
Cdh11P55288 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh11P55288 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh11P55288 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh11P55288 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cdh11P55288 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh11P55288 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh11P55288 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.1■□□□□ 0.33
Cdh11P55288 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh11P55288 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Cdh11P55288 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
Cdh11P55288 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh11P55288 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh11P55288 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh11P55288 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms