Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdkn2bP55271 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdkn2bP55271 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Cdkn2bP55271 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.11■□□□□ 0.49
Cdkn2bP55271 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cdkn2bP55271 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdkn2bP55271 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdkn2bP55271 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.11■□□□□ 0.49
Cdkn2bP55271 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Cdkn2bP55271 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdkn2bP55271 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cdkn2bP55271 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cdkn2bP55271 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cdkn2bP55271 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cdkn2bP55271 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdkn2bP55271 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdkn2bP55271 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cdkn2bP55271 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cdkn2bP55271 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdkn2bP55271 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdkn2bP55271 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Cdkn2bP55271 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cdkn2bP55271 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cdkn2bP55271 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdkn2bP55271 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Cdkn2bP55271 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.09■□□□□ 0.49
Cdkn2bP55271 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdkn2bP55271 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.09■□□□□ 0.49
Cdkn2bP55271 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.09■□□□□ 0.49
Cdkn2bP55271 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdkn2bP55271 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdkn2bP55271 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdkn2bP55271 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdkn2bP55271 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cdkn2bP55271 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cdkn2bP55271 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cdkn2bP55271 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Cdkn2bP55271 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdkn2bP55271 Gm12251-201ENSMUST00000117893 792 ntBASIC18.08■□□□□ 0.48
Cdkn2bP55271 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdkn2bP55271 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cdkn2bP55271 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Cdkn2bP55271 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdkn2bP55271 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdkn2bP55271 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Cdkn2bP55271 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdkn2bP55271 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdkn2bP55271 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cdkn2bP55271 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cdkn2bP55271 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.07■□□□□ 0.48
Cdkn2bP55271 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdkn2bP55271 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.07■□□□□ 0.48
Cdkn2bP55271 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cdkn2bP55271 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdkn2bP55271 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.07■□□□□ 0.48
Cdkn2bP55271 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdkn2bP55271 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdkn2bP55271 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.07■□□□□ 0.48
Cdkn2bP55271 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cdkn2bP55271 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdkn2bP55271 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdkn2bP55271 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cdkn2bP55271 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.06■□□□□ 0.48
Cdkn2bP55271 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.06■□□□□ 0.48
Cdkn2bP55271 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.06■□□□□ 0.48
Cdkn2bP55271 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdkn2bP55271 Gm43137-201ENSMUST00000198052 594 ntBASIC18.06■□□□□ 0.48
Cdkn2bP55271 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cdkn2bP55271 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdkn2bP55271 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdkn2bP55271 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
Cdkn2bP55271 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdkn2bP55271 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cdkn2bP55271 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdkn2bP55271 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Cdkn2bP55271 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Cdkn2bP55271 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdkn2bP55271 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdkn2bP55271 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.05■□□□□ 0.48
Cdkn2bP55271 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.05■□□□□ 0.48
Cdkn2bP55271 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdkn2bP55271 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cdkn2bP55271 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdkn2bP55271 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdkn2bP55271 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdkn2bP55271 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdkn2bP55271 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdkn2bP55271 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Cdkn2bP55271 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdkn2bP55271 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdkn2bP55271 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdkn2bP55271 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cdkn2bP55271 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdkn2bP55271 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdkn2bP55271 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdkn2bP55271 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.04■□□□□ 0.48
Cdkn2bP55271 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Cdkn2bP55271 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdkn2bP55271 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Cdkn2bP55271 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms