Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.16■□□□□ 0.82
NcanP55066 Gm30025-201ENSMUST00000218555 728 ntBASIC20.16■□□□□ 0.82
NcanP55066 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NcanP55066 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
NcanP55066 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NcanP55066 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NcanP55066 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
NcanP55066 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NcanP55066 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.15■□□□□ 0.82
NcanP55066 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NcanP55066 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.15■□□□□ 0.82
NcanP55066 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NcanP55066 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
NcanP55066 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NcanP55066 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
NcanP55066 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NcanP55066 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
NcanP55066 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NcanP55066 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NcanP55066 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NcanP55066 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.14■□□□□ 0.81
NcanP55066 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.14■□□□□ 0.81
NcanP55066 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NcanP55066 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NcanP55066 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NcanP55066 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NcanP55066 Gm13559-201ENSMUST00000120476 863 ntBASIC20.14■□□□□ 0.81
NcanP55066 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.14■□□□□ 0.81
NcanP55066 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NcanP55066 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NcanP55066 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC20.14■□□□□ 0.81
NcanP55066 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NcanP55066 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
NcanP55066 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NcanP55066 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NcanP55066 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NcanP55066 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NcanP55066 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NcanP55066 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NcanP55066 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
NcanP55066 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NcanP55066 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.13■□□□□ 0.81
NcanP55066 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NcanP55066 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.13■□□□□ 0.81
NcanP55066 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NcanP55066 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NcanP55066 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
NcanP55066 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NcanP55066 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.12■□□□□ 0.81
NcanP55066 Gm11539-201ENSMUST00000119837 557 ntBASIC20.12■□□□□ 0.81
NcanP55066 Gm13436-201ENSMUST00000120418 567 ntBASIC20.12■□□□□ 0.81
NcanP55066 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
NcanP55066 Gm44771-201ENSMUST00000206975 626 ntBASIC20.12■□□□□ 0.81
NcanP55066 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC20.12■□□□□ 0.81
NcanP55066 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
NcanP55066 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.12■□□□□ 0.81
NcanP55066 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NcanP55066 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NcanP55066 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NcanP55066 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.11■□□□□ 0.81
NcanP55066 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.11■□□□□ 0.81
NcanP55066 Gm21814-202ENSMUST00000203277 873 ntBASIC20.11■□□□□ 0.81
NcanP55066 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.11■□□□□ 0.81
NcanP55066 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.11■□□□□ 0.81
NcanP55066 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.11■□□□□ 0.81
NcanP55066 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NcanP55066 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
NcanP55066 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NcanP55066 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NcanP55066 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
NcanP55066 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
NcanP55066 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NcanP55066 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.1■□□□□ 0.81
NcanP55066 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NcanP55066 Gm11927-201ENSMUST00000118472 759 ntBASIC20.1■□□□□ 0.81
NcanP55066 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NcanP55066 Gm7889-201ENSMUST00000185591 958 ntBASIC20.1■□□□□ 0.81
NcanP55066 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NcanP55066 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NcanP55066 Gm7461-201ENSMUST00000058918 827 ntBASIC20.1■□□□□ 0.81
NcanP55066 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
NcanP55066 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NcanP55066 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NcanP55066 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NcanP55066 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NcanP55066 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.09■□□□□ 0.81
NcanP55066 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NcanP55066 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
NcanP55066 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.09■□□□□ 0.81
NcanP55066 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC20.09■□□□□ 0.81
NcanP55066 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.09■□□□□ 0.81
NcanP55066 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NcanP55066 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NcanP55066 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
NcanP55066 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NcanP55066 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
NcanP55066 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.08■□□□□ 0.81
NcanP55066 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
NcanP55066 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NcanP55066 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms