Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC24.16■■□□□ 1.46
Msh6P54276 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
Msh6P54276 Gm13509-201ENSMUST00000119733 1308 ntBASIC24.16■■□□□ 1.46
Msh6P54276 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Msh6P54276 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Msh6P54276 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
Msh6P54276 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Msh6P54276 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Msh6P54276 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Msh6P54276 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC24.15■■□□□ 1.46
Msh6P54276 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC24.15■■□□□ 1.46
Msh6P54276 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
Msh6P54276 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Msh6P54276 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Msh6P54276 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Msh6P54276 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Msh6P54276 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Msh6P54276 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Msh6P54276 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.46
Msh6P54276 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Msh6P54276 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
Msh6P54276 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Msh6P54276 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
Msh6P54276 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Msh6P54276 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Msh6P54276 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Msh6P54276 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Msh6P54276 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Msh6P54276 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Msh6P54276 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Msh6P54276 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC24.13■■□□□ 1.45
Msh6P54276 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Msh6P54276 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC24.13■■□□□ 1.45
Msh6P54276 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Msh6P54276 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Msh6P54276 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Msh6P54276 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Msh6P54276 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Msh6P54276 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
Msh6P54276 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Msh6P54276 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
Msh6P54276 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Msh6P54276 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC24.12■■□□□ 1.45
Msh6P54276 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Msh6P54276 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Msh6P54276 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC24.11■■□□□ 1.45
Msh6P54276 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Msh6P54276 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Msh6P54276 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Msh6P54276 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Msh6P54276 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Msh6P54276 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Msh6P54276 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Msh6P54276 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
Msh6P54276 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Msh6P54276 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Msh6P54276 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Msh6P54276 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Msh6P54276 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Msh6P54276 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC24.1■■□□□ 1.45
Msh6P54276 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Msh6P54276 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC24.1■■□□□ 1.45
Msh6P54276 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC24.1■■□□□ 1.45
Msh6P54276 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC24.1■■□□□ 1.45
Msh6P54276 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Msh6P54276 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Msh6P54276 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Msh6P54276 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC24.09■■□□□ 1.45
Msh6P54276 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Msh6P54276 Gm26971-201ENSMUST00000182423 1072 ntBASIC24.09■■□□□ 1.45
Msh6P54276 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Msh6P54276 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Msh6P54276 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Msh6P54276 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC24.09■■□□□ 1.45
Msh6P54276 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC24.09■■□□□ 1.45
Msh6P54276 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Msh6P54276 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Msh6P54276 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Msh6P54276 Dio3-201ENSMUST00000097228 1449 ntBASIC24.09■■□□□ 1.45
Msh6P54276 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
Msh6P54276 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
Msh6P54276 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Msh6P54276 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Msh6P54276 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC24.08■■□□□ 1.44
Msh6P54276 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Msh6P54276 Hsf1-204ENSMUST00000226872 2104 ntBASIC24.07■■□□□ 1.44
Msh6P54276 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Msh6P54276 Gm5540-201ENSMUST00000131852 1848 ntBASIC24.07■■□□□ 1.44
Msh6P54276 Gm13836-201ENSMUST00000121159 501 ntBASIC24.07■■□□□ 1.44
Msh6P54276 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC24.07■■□□□ 1.44
Msh6P54276 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC24.07■■□□□ 1.44
Msh6P54276 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Msh6P54276 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Msh6P54276 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Msh6P54276 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Msh6P54276 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
Msh6P54276 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Msh6P54276 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Msh6P54276 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Msh6P54276 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms