Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atxn1P54254 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Atxn1P54254 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Atxn1P54254 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.74■□□□□ 0.59
Atxn1P54254 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.74■□□□□ 0.59
Atxn1P54254 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atxn1P54254 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atxn1P54254 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atxn1P54254 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atxn1P54254 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atxn1P54254 Gm5643-201ENSMUST00000117081 966 ntBASIC18.74■□□□□ 0.59
Atxn1P54254 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.74■□□□□ 0.59
Atxn1P54254 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.74■□□□□ 0.59
Atxn1P54254 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.74■□□□□ 0.59
Atxn1P54254 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Atxn1P54254 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atxn1P54254 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atxn1P54254 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atxn1P54254 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atxn1P54254 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.73■□□□□ 0.59
Atxn1P54254 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.73■□□□□ 0.59
Atxn1P54254 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atxn1P54254 Gm13534-201ENSMUST00000121169 513 ntBASIC18.73■□□□□ 0.59
Atxn1P54254 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Atxn1P54254 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atxn1P54254 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atxn1P54254 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Atxn1P54254 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.73■□□□□ 0.59
Atxn1P54254 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atxn1P54254 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atxn1P54254 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atxn1P54254 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atxn1P54254 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Atxn1P54254 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atxn1P54254 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atxn1P54254 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atxn1P54254 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Atxn1P54254 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.72■□□□□ 0.59
Atxn1P54254 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atxn1P54254 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atxn1P54254 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atxn1P54254 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Atxn1P54254 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Atxn1P54254 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Atxn1P54254 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atxn1P54254 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atxn1P54254 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Atxn1P54254 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atxn1P54254 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atxn1P54254 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atxn1P54254 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atxn1P54254 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atxn1P54254 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atxn1P54254 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Atxn1P54254 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Atxn1P54254 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Atxn1P54254 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atxn1P54254 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atxn1P54254 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atxn1P54254 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atxn1P54254 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atxn1P54254 Gm12896-201ENSMUST00000118430 226 ntBASIC18.7■□□□□ 0.58
Atxn1P54254 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.7■□□□□ 0.58
Atxn1P54254 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Atxn1P54254 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.7■□□□□ 0.58
Atxn1P54254 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Atxn1P54254 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atxn1P54254 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atxn1P54254 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atxn1P54254 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Atxn1P54254 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atxn1P54254 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atxn1P54254 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atxn1P54254 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atxn1P54254 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Atxn1P54254 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Atxn1P54254 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atxn1P54254 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atxn1P54254 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atxn1P54254 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Atxn1P54254 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Atxn1P54254 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.69■□□□□ 0.58
Atxn1P54254 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atxn1P54254 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atxn1P54254 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atxn1P54254 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Atxn1P54254 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.68■□□□□ 0.58
Atxn1P54254 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Atxn1P54254 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atxn1P54254 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atxn1P54254 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Atxn1P54254 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atxn1P54254 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atxn1P54254 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atxn1P54254 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atxn1P54254 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Atxn1P54254 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.67■□□□□ 0.58
Atxn1P54254 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.67■□□□□ 0.58
Atxn1P54254 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atxn1P54254 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms