Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox1P53783 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox1P53783 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.43■□□□□ 0.7
Sox1P53783 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox1P53783 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox1P53783 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.43■□□□□ 0.7
Sox1P53783 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox1P53783 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox1P53783 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sox1P53783 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox1P53783 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox1P53783 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.42■□□□□ 0.7
Sox1P53783 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sox1P53783 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sox1P53783 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox1P53783 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Sox1P53783 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox1P53783 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sox1P53783 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.42■□□□□ 0.7
Sox1P53783 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox1P53783 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox1P53783 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox1P53783 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox1P53783 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox1P53783 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Sox1P53783 Gm14859-201ENSMUST00000117752 357 ntBASIC19.41■□□□□ 0.7
Sox1P53783 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.41■□□□□ 0.7
Sox1P53783 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox1P53783 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox1P53783 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox1P53783 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox1P53783 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.41■□□□□ 0.7
Sox1P53783 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox1P53783 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox1P53783 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox1P53783 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.4■□□□□ 0.7
Sox1P53783 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox1P53783 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.4■□□□□ 0.7
Sox1P53783 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.4■□□□□ 0.7
Sox1P53783 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.4■□□□□ 0.7
Sox1P53783 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox1P53783 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.4■□□□□ 0.7
Sox1P53783 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.4■□□□□ 0.7
Sox1P53783 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sox1P53783 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sox1P53783 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox1P53783 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox1P53783 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sox1P53783 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sox1P53783 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Sox1P53783 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sox1P53783 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sox1P53783 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sox1P53783 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sox1P53783 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sox1P53783 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sox1P53783 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sox1P53783 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sox1P53783 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sox1P53783 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.38■□□□□ 0.69
Sox1P53783 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Sox1P53783 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sox1P53783 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox1P53783 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Sox1P53783 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox1P53783 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.37■□□□□ 0.69
Sox1P53783 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.37■□□□□ 0.69
Sox1P53783 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox1P53783 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sox1P53783 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sox1P53783 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox1P53783 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox1P53783 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sox1P53783 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Sox1P53783 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox1P53783 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Sox1P53783 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.36■□□□□ 0.69
Sox1P53783 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox1P53783 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox1P53783 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.35■□□□□ 0.69
Sox1P53783 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Sox1P53783 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Sox1P53783 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sox1P53783 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Sox1P53783 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox1P53783 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox1P53783 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Sox1P53783 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox1P53783 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox1P53783 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sox1P53783 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sox1P53783 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sox1P53783 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sox1P53783 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sox1P53783 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sox1P53783 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sox1P53783 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sox1P53783 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sox1P53783 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sox1P53783 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms