Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lhx4P53776 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lhx4P53776 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lhx4P53776 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lhx4P53776 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lhx4P53776 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lhx4P53776 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lhx4P53776 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx4P53776 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Lhx4P53776 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx4P53776 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx4P53776 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx4P53776 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC15.92■□□□□ 0.14
Lhx4P53776 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
Lhx4P53776 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx4P53776 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx4P53776 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx4P53776 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx4P53776 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx4P53776 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lhx4P53776 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lhx4P53776 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.91■□□□□ 0.14
Lhx4P53776 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC15.91■□□□□ 0.14
Lhx4P53776 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lhx4P53776 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Lhx4P53776 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Lhx4P53776 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lhx4P53776 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lhx4P53776 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC15.91■□□□□ 0.14
Lhx4P53776 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lhx4P53776 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lhx4P53776 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.91■□□□□ 0.14
Lhx4P53776 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lhx4P53776 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lhx4P53776 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Lhx4P53776 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Lhx4P53776 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC15.9■□□□□ 0.14
Lhx4P53776 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Lhx4P53776 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Lhx4P53776 Gm10493-201ENSMUST00000097270 612 ntBASIC15.9■□□□□ 0.14
Lhx4P53776 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lhx4P53776 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Lhx4P53776 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
Lhx4P53776 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Lhx4P53776 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.9■□□□□ 0.14
Lhx4P53776 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.9■□□□□ 0.14
Lhx4P53776 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lhx4P53776 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lhx4P53776 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC15.89■□□□□ 0.13
Lhx4P53776 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Lhx4P53776 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lhx4P53776 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Lhx4P53776 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lhx4P53776 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lhx4P53776 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Lhx4P53776 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC15.89■□□□□ 0.13
Lhx4P53776 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Lhx4P53776 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lhx4P53776 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lhx4P53776 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.89■□□□□ 0.13
Lhx4P53776 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lhx4P53776 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Lhx4P53776 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lhx4P53776 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.89■□□□□ 0.13
Lhx4P53776 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lhx4P53776 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lhx4P53776 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Lhx4P53776 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Lhx4P53776 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lhx4P53776 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lhx4P53776 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Lhx4P53776 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Lhx4P53776 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC15.88■□□□□ 0.13
Lhx4P53776 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.88■□□□□ 0.13
Lhx4P53776 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.88■□□□□ 0.13
Lhx4P53776 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.88■□□□□ 0.13
Lhx4P53776 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lhx4P53776 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lhx4P53776 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lhx4P53776 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lhx4P53776 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lhx4P53776 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Lhx4P53776 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Lhx4P53776 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lhx4P53776 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.88■□□□□ 0.13
Lhx4P53776 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lhx4P53776 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Lhx4P53776 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lhx4P53776 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lhx4P53776 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lhx4P53776 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Lhx4P53776 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lhx4P53776 Golph3-205ENSMUST00000228671 2842 ntBASIC15.87■□□□□ 0.13
Lhx4P53776 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lhx4P53776 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lhx4P53776 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lhx4P53776 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Lhx4P53776 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.87■□□□□ 0.13
Lhx4P53776 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Lhx4P53776 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms