Protein–RNA interactions for Protein: P50516

Atp6v1a, V-type proton ATPase catalytic subunit A, mousemouse

Known RBP Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1aP50516 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Atp6v1aP50516 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Atp6v1aP50516 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Atp6v1aP50516 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
Atp6v1aP50516 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
Atp6v1aP50516 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Atp6v1aP50516 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Atp6v1aP50516 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Atp6v1aP50516 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
Atp6v1aP50516 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Atp6v1aP50516 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Atp6v1aP50516 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC22.77■■□□□ 1.24
Atp6v1aP50516 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC22.77■■□□□ 1.24
Atp6v1aP50516 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC22.77■■□□□ 1.24
Atp6v1aP50516 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
Atp6v1aP50516 AC154649.1-201ENSMUST00000227392 384 ntBASIC22.77■■□□□ 1.24
Atp6v1aP50516 AC124392.1-201ENSMUST00000225172 5324 ntBASIC22.77■■□□□ 1.24
Atp6v1aP50516 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Atp6v1aP50516 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Atp6v1aP50516 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Atp6v1aP50516 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Atp6v1aP50516 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Atp6v1aP50516 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Atp6v1aP50516 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC22.76■■□□□ 1.23
Atp6v1aP50516 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Atp6v1aP50516 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Atp6v1aP50516 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Atp6v1aP50516 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Atp6v1aP50516 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Atp6v1aP50516 Gm21596-201ENSMUST00000178049 1316 ntBASIC22.76■■□□□ 1.23
Atp6v1aP50516 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Atp6v1aP50516 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Atp6v1aP50516 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Atp6v1aP50516 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Atp6v1aP50516 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
Atp6v1aP50516 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
Atp6v1aP50516 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Atp6v1aP50516 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Atp6v1aP50516 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC22.75■■□□□ 1.23
Atp6v1aP50516 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Atp6v1aP50516 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC22.75■■□□□ 1.23
Atp6v1aP50516 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Atp6v1aP50516 Krtap5-1-202ENSMUST00000188274 742 ntBASIC22.75■■□□□ 1.23
Atp6v1aP50516 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC22.75■■□□□ 1.23
Atp6v1aP50516 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Atp6v1aP50516 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Atp6v1aP50516 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Atp6v1aP50516 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Atp6v1aP50516 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Atp6v1aP50516 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC22.74■■□□□ 1.23
Atp6v1aP50516 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Atp6v1aP50516 Nrn1-203ENSMUST00000223611 1443 ntBASIC22.74■■□□□ 1.23
Atp6v1aP50516 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Atp6v1aP50516 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Atp6v1aP50516 Gm10698-201ENSMUST00000182663 604 ntBASIC22.74■■□□□ 1.23
Atp6v1aP50516 Gm18666-201ENSMUST00000190039 958 ntBASIC22.74■■□□□ 1.23
Atp6v1aP50516 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Atp6v1aP50516 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
Atp6v1aP50516 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Atp6v1aP50516 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Atp6v1aP50516 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC22.73■■□□□ 1.23
Atp6v1aP50516 Gm2399-201ENSMUST00000104944 225 ntBASIC22.73■■□□□ 1.23
Atp6v1aP50516 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Atp6v1aP50516 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Atp6v1aP50516 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Atp6v1aP50516 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Atp6v1aP50516 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Atp6v1aP50516 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Atp6v1aP50516 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Atp6v1aP50516 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Atp6v1aP50516 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC22.72■■□□□ 1.23
Atp6v1aP50516 Gm29994-201ENSMUST00000195495 1193 ntBASIC22.72■■□□□ 1.23
Atp6v1aP50516 AC153881.1-201ENSMUST00000214448 284 ntBASIC22.72■■□□□ 1.23
Atp6v1aP50516 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Atp6v1aP50516 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Atp6v1aP50516 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Atp6v1aP50516 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Atp6v1aP50516 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Atp6v1aP50516 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Atp6v1aP50516 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Atp6v1aP50516 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC22.71■■□□□ 1.23
Atp6v1aP50516 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC22.71■■□□□ 1.23
Atp6v1aP50516 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC22.71■■□□□ 1.23
Atp6v1aP50516 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Atp6v1aP50516 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Atp6v1aP50516 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Atp6v1aP50516 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Atp6v1aP50516 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Atp6v1aP50516 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Atp6v1aP50516 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC22.7■■□□□ 1.22
Atp6v1aP50516 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Atp6v1aP50516 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC22.7■■□□□ 1.22
Atp6v1aP50516 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Atp6v1aP50516 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC22.7■■□□□ 1.22
Atp6v1aP50516 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Atp6v1aP50516 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC22.7■■□□□ 1.22
Atp6v1aP50516 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Atp6v1aP50516 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Atp6v1aP50516 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
Atp6v1aP50516 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms