Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.23■□□□□ 0.67
Lhx3P50481 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.23■□□□□ 0.67
Lhx3P50481 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lhx3P50481 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lhx3P50481 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lhx3P50481 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lhx3P50481 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lhx3P50481 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lhx3P50481 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.22■□□□□ 0.67
Lhx3P50481 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Lhx3P50481 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.22■□□□□ 0.67
Lhx3P50481 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lhx3P50481 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Lhx3P50481 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lhx3P50481 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lhx3P50481 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lhx3P50481 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lhx3P50481 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lhx3P50481 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lhx3P50481 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lhx3P50481 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Lhx3P50481 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lhx3P50481 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Lhx3P50481 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lhx3P50481 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lhx3P50481 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lhx3P50481 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.21■□□□□ 0.67
Lhx3P50481 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.21■□□□□ 0.67
Lhx3P50481 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lhx3P50481 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lhx3P50481 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lhx3P50481 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Lhx3P50481 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.21■□□□□ 0.67
Lhx3P50481 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.21■□□□□ 0.66
Lhx3P50481 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lhx3P50481 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lhx3P50481 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Lhx3P50481 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.2■□□□□ 0.66
Lhx3P50481 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.2■□□□□ 0.66
Lhx3P50481 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lhx3P50481 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lhx3P50481 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.2■□□□□ 0.66
Lhx3P50481 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lhx3P50481 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.19■□□□□ 0.66
Lhx3P50481 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lhx3P50481 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lhx3P50481 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.19■□□□□ 0.66
Lhx3P50481 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.19■□□□□ 0.66
Lhx3P50481 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lhx3P50481 Gm12933-201ENSMUST00000120203 872 ntBASIC19.19■□□□□ 0.66
Lhx3P50481 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.19■□□□□ 0.66
Lhx3P50481 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lhx3P50481 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Lhx3P50481 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lhx3P50481 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lhx3P50481 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lhx3P50481 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lhx3P50481 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lhx3P50481 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lhx3P50481 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lhx3P50481 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lhx3P50481 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lhx3P50481 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.18■□□□□ 0.66
Lhx3P50481 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Lhx3P50481 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lhx3P50481 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lhx3P50481 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lhx3P50481 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.17■□□□□ 0.66
Lhx3P50481 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lhx3P50481 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lhx3P50481 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Lhx3P50481 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lhx3P50481 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Lhx3P50481 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lhx3P50481 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lhx3P50481 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lhx3P50481 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lhx3P50481 Gm6365-201ENSMUST00000054711 744 ntBASIC19.17■□□□□ 0.66
Lhx3P50481 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lhx3P50481 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lhx3P50481 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lhx3P50481 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lhx3P50481 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lhx3P50481 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lhx3P50481 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Lhx3P50481 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Lhx3P50481 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.16■□□□□ 0.66
Lhx3P50481 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Lhx3P50481 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Lhx3P50481 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lhx3P50481 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Lhx3P50481 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lhx3P50481 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lhx3P50481 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lhx3P50481 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lhx3P50481 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lhx3P50481 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lhx3P50481 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lhx3P50481 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lhx3P50481 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms