Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Gm13146-201ENSMUST00000118508 780 ntBASIC19.76■□□□□ 0.75
Rfx2P48379 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx2P48379 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx2P48379 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx2P48379 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx2P48379 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx2P48379 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx2P48379 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx2P48379 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Rfx2P48379 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Rfx2P48379 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx2P48379 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx2P48379 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx2P48379 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx2P48379 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx2P48379 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx2P48379 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx2P48379 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Rfx2P48379 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx2P48379 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx2P48379 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx2P48379 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx2P48379 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx2P48379 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx2P48379 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfx2P48379 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfx2P48379 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rfx2P48379 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfx2P48379 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfx2P48379 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfx2P48379 Mir5133-201ENSMUST00000174955 77 ntBASIC19.73■□□□□ 0.75
Rfx2P48379 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.73■□□□□ 0.75
Rfx2P48379 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfx2P48379 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfx2P48379 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Rfx2P48379 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfx2P48379 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx2P48379 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx2P48379 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx2P48379 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx2P48379 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx2P48379 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx2P48379 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx2P48379 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx2P48379 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Rfx2P48379 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Rfx2P48379 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Rfx2P48379 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx2P48379 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx2P48379 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.71■□□□□ 0.75
Rfx2P48379 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Rfx2P48379 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx2P48379 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx2P48379 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx2P48379 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Rfx2P48379 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Rfx2P48379 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx2P48379 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Rfx2P48379 Gm38205-201ENSMUST00000192243 258 ntBASIC19.71■□□□□ 0.75
Rfx2P48379 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.71■□□□□ 0.75
Rfx2P48379 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.71■□□□□ 0.75
Rfx2P48379 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx2P48379 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Rfx2P48379 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Rfx2P48379 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx2P48379 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx2P48379 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx2P48379 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfx2P48379 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfx2P48379 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfx2P48379 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.7■□□□□ 0.74
Rfx2P48379 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Rfx2P48379 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Rfx2P48379 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfx2P48379 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Rfx2P48379 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfx2P48379 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
Rfx2P48379 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx2P48379 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx2P48379 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx2P48379 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx2P48379 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx2P48379 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx2P48379 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.69■□□□□ 0.74
Rfx2P48379 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.69■□□□□ 0.74
Rfx2P48379 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx2P48379 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Rfx2P48379 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.68■□□□□ 0.74
Rfx2P48379 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.68■□□□□ 0.74
Rfx2P48379 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.68■□□□□ 0.74
Rfx2P48379 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfx2P48379 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.68■□□□□ 0.74
Rfx2P48379 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx2P48379 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx2P48379 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx2P48379 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.67■□□□□ 0.74
Rfx2P48379 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Rfx2P48379 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx2P48379 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx2P48379 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms