Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdx2P43241 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.03■□□□□ 0.48
Cdx2P43241 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdx2P43241 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdx2P43241 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdx2P43241 Gm10698-201ENSMUST00000182663 604 ntBASIC18.02■□□□□ 0.48
Cdx2P43241 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdx2P43241 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdx2P43241 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Cdx2P43241 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.02■□□□□ 0.47
Cdx2P43241 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cdx2P43241 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cdx2P43241 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cdx2P43241 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Cdx2P43241 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.01■□□□□ 0.47
Cdx2P43241 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.01■□□□□ 0.47
Cdx2P43241 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdx2P43241 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Cdx2P43241 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdx2P43241 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdx2P43241 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.01■□□□□ 0.47
Cdx2P43241 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.01■□□□□ 0.47
Cdx2P43241 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.01■□□□□ 0.47
Cdx2P43241 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdx2P43241 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdx2P43241 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Cdx2P43241 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdx2P43241 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdx2P43241 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdx2P43241 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdx2P43241 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdx2P43241 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdx2P43241 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Cdx2P43241 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdx2P43241 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Cdx2P43241 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdx2P43241 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdx2P43241 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18■□□□□ 0.47
Cdx2P43241 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Cdx2P43241 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Cdx2P43241 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18■□□□□ 0.47
Cdx2P43241 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdx2P43241 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdx2P43241 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdx2P43241 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Cdx2P43241 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdx2P43241 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdx2P43241 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.99■□□□□ 0.47
Cdx2P43241 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Cdx2P43241 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdx2P43241 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Cdx2P43241 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdx2P43241 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdx2P43241 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdx2P43241 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Cdx2P43241 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdx2P43241 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.98■□□□□ 0.47
Cdx2P43241 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdx2P43241 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cdx2P43241 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.98■□□□□ 0.47
Cdx2P43241 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdx2P43241 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Cdx2P43241 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdx2P43241 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdx2P43241 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cdx2P43241 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.98■□□□□ 0.47
Cdx2P43241 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Cdx2P43241 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.98■□□□□ 0.47
Cdx2P43241 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdx2P43241 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.97■□□□□ 0.47
Cdx2P43241 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdx2P43241 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdx2P43241 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdx2P43241 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdx2P43241 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdx2P43241 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Cdx2P43241 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Cdx2P43241 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.97■□□□□ 0.47
Cdx2P43241 Gm15378-201ENSMUST00000121894 207 ntBASIC17.97■□□□□ 0.47
Cdx2P43241 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdx2P43241 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cdx2P43241 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdx2P43241 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.97■□□□□ 0.47
Cdx2P43241 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdx2P43241 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdx2P43241 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Cdx2P43241 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdx2P43241 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdx2P43241 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.96■□□□□ 0.47
Cdx2P43241 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdx2P43241 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.96■□□□□ 0.47
Cdx2P43241 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.96■□□□□ 0.47
Cdx2P43241 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.47
Cdx2P43241 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdx2P43241 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdx2P43241 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdx2P43241 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdx2P43241 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdx2P43241 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdx2P43241 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 97.2 ms