Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cd9P40240 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cd9P40240 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cd9P40240 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Cd9P40240 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Cd9P40240 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cd9P40240 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cd9P40240 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cd9P40240 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.72■□□□□ 0.59
Cd9P40240 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cd9P40240 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cd9P40240 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cd9P40240 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cd9P40240 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cd9P40240 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cd9P40240 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cd9P40240 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cd9P40240 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cd9P40240 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.71■□□□□ 0.59
Cd9P40240 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.71■□□□□ 0.59
Cd9P40240 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cd9P40240 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.71■□□□□ 0.59
Cd9P40240 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cd9P40240 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cd9P40240 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.71■□□□□ 0.59
Cd9P40240 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cd9P40240 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cd9P40240 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Cd9P40240 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Cd9P40240 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cd9P40240 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cd9P40240 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.7■□□□□ 0.58
Cd9P40240 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cd9P40240 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cd9P40240 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cd9P40240 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cd9P40240 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cd9P40240 Gm13534-201ENSMUST00000121169 513 ntBASIC18.7■□□□□ 0.58
Cd9P40240 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.7■□□□□ 0.58
Cd9P40240 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.7■□□□□ 0.58
Cd9P40240 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cd9P40240 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cd9P40240 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cd9P40240 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Cd9P40240 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cd9P40240 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cd9P40240 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cd9P40240 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cd9P40240 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cd9P40240 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Cd9P40240 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cd9P40240 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cd9P40240 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cd9P40240 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cd9P40240 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cd9P40240 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cd9P40240 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cd9P40240 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.68■□□□□ 0.58
Cd9P40240 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.68■□□□□ 0.58
Cd9P40240 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cd9P40240 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Cd9P40240 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Cd9P40240 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cd9P40240 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cd9P40240 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.68■□□□□ 0.58
Cd9P40240 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cd9P40240 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cd9P40240 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cd9P40240 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cd9P40240 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Cd9P40240 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cd9P40240 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.67■□□□□ 0.58
Cd9P40240 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.67■□□□□ 0.58
Cd9P40240 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cd9P40240 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cd9P40240 Reep4-203ENSMUST00000226563 1444 ntBASIC18.66■□□□□ 0.58
Cd9P40240 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cd9P40240 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cd9P40240 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cd9P40240 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cd9P40240 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.66■□□□□ 0.58
Cd9P40240 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cd9P40240 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cd9P40240 Gm13234-201ENSMUST00000120010 747 ntBASIC18.66■□□□□ 0.58
Cd9P40240 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cd9P40240 Gm9988-201ENSMUST00000069786 435 ntBASIC18.66■□□□□ 0.58
Cd9P40240 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Cd9P40240 Gm10493-201ENSMUST00000097270 612 ntBASIC18.66■□□□□ 0.58
Cd9P40240 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.66■□□□□ 0.58
Cd9P40240 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cd9P40240 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.66■□□□□ 0.58
Cd9P40240 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cd9P40240 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Cd9P40240 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cd9P40240 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cd9P40240 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.66■□□□□ 0.58
Cd9P40240 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cd9P40240 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cd9P40240 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Cd9P40240 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms