Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HmgclP38060 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HmgclP38060 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HmgclP38060 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
HmgclP38060 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HmgclP38060 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HmgclP38060 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HmgclP38060 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HmgclP38060 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HmgclP38060 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HmgclP38060 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HmgclP38060 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.63■□□□□ 0.57
HmgclP38060 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HmgclP38060 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HmgclP38060 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HmgclP38060 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HmgclP38060 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HmgclP38060 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HmgclP38060 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.63■□□□□ 0.57
HmgclP38060 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HmgclP38060 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HmgclP38060 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HmgclP38060 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HmgclP38060 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HmgclP38060 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
HmgclP38060 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HmgclP38060 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HmgclP38060 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
HmgclP38060 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
HmgclP38060 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HmgclP38060 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HmgclP38060 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HmgclP38060 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
HmgclP38060 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HmgclP38060 Gm42778-201ENSMUST00000199644 553 ntBASIC18.62■□□□□ 0.57
HmgclP38060 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
HmgclP38060 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HmgclP38060 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HmgclP38060 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HmgclP38060 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HmgclP38060 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.62■□□□□ 0.57
HmgclP38060 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HmgclP38060 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
HmgclP38060 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HmgclP38060 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HmgclP38060 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HmgclP38060 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HmgclP38060 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HmgclP38060 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HmgclP38060 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
HmgclP38060 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HmgclP38060 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HmgclP38060 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HmgclP38060 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.61■□□□□ 0.57
HmgclP38060 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.61■□□□□ 0.57
HmgclP38060 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
HmgclP38060 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HmgclP38060 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HmgclP38060 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HmgclP38060 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HmgclP38060 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HmgclP38060 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HmgclP38060 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HmgclP38060 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
HmgclP38060 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HmgclP38060 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HmgclP38060 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HmgclP38060 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HmgclP38060 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HmgclP38060 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.6■□□□□ 0.57
HmgclP38060 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HmgclP38060 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HmgclP38060 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HmgclP38060 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
HmgclP38060 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HmgclP38060 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HmgclP38060 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
HmgclP38060 Gm13534-201ENSMUST00000121169 513 ntBASIC18.59■□□□□ 0.57
HmgclP38060 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.59■□□□□ 0.57
HmgclP38060 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HmgclP38060 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HmgclP38060 Gm5874-201ENSMUST00000096101 508 ntBASIC18.59■□□□□ 0.57
HmgclP38060 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
HmgclP38060 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HmgclP38060 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HmgclP38060 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HmgclP38060 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HmgclP38060 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HmgclP38060 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HmgclP38060 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
HmgclP38060 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.58■□□□□ 0.57
HmgclP38060 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.58■□□□□ 0.57
HmgclP38060 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HmgclP38060 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HmgclP38060 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
HmgclP38060 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HmgclP38060 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HmgclP38060 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
HmgclP38060 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
HmgclP38060 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms