Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LdlrP35951 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LdlrP35951 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LdlrP35951 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LdlrP35951 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LdlrP35951 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LdlrP35951 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LdlrP35951 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LdlrP35951 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
LdlrP35951 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
LdlrP35951 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LdlrP35951 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.75■□□□□ 0.59
LdlrP35951 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LdlrP35951 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
LdlrP35951 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LdlrP35951 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LdlrP35951 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
LdlrP35951 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LdlrP35951 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LdlrP35951 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.74■□□□□ 0.59
LdlrP35951 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LdlrP35951 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LdlrP35951 Gm7291-201ENSMUST00000199147 382 ntBASIC18.74■□□□□ 0.59
LdlrP35951 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.74■□□□□ 0.59
LdlrP35951 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LdlrP35951 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
LdlrP35951 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LdlrP35951 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LdlrP35951 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LdlrP35951 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LdlrP35951 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LdlrP35951 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LdlrP35951 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LdlrP35951 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LdlrP35951 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LdlrP35951 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LdlrP35951 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
LdlrP35951 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LdlrP35951 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LdlrP35951 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LdlrP35951 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LdlrP35951 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LdlrP35951 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LdlrP35951 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LdlrP35951 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LdlrP35951 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.72■□□□□ 0.59
LdlrP35951 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LdlrP35951 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
LdlrP35951 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LdlrP35951 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
LdlrP35951 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LdlrP35951 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LdlrP35951 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.71■□□□□ 0.59
LdlrP35951 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
LdlrP35951 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.71■□□□□ 0.59
LdlrP35951 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LdlrP35951 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.71■□□□□ 0.59
LdlrP35951 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LdlrP35951 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.71■□□□□ 0.59
LdlrP35951 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.71■□□□□ 0.59
LdlrP35951 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
LdlrP35951 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LdlrP35951 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
LdlrP35951 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
LdlrP35951 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LdlrP35951 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LdlrP35951 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LdlrP35951 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LdlrP35951 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LdlrP35951 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LdlrP35951 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LdlrP35951 Gm12251-201ENSMUST00000117893 792 ntBASIC18.7■□□□□ 0.58
LdlrP35951 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LdlrP35951 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LdlrP35951 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LdlrP35951 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LdlrP35951 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LdlrP35951 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LdlrP35951 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LdlrP35951 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LdlrP35951 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.69■□□□□ 0.58
LdlrP35951 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.69■□□□□ 0.58
LdlrP35951 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LdlrP35951 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LdlrP35951 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
LdlrP35951 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LdlrP35951 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LdlrP35951 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.69■□□□□ 0.58
LdlrP35951 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.69■□□□□ 0.58
LdlrP35951 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.69■□□□□ 0.58
LdlrP35951 Grk6-206ENSMUST00000224995 2971 ntBASIC18.69■□□□□ 0.58
LdlrP35951 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LdlrP35951 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
LdlrP35951 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
LdlrP35951 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LdlrP35951 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.69■□□□□ 0.58
LdlrP35951 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.69■□□□□ 0.58
LdlrP35951 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LdlrP35951 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
LdlrP35951 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms