Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Sox5P35710 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sox5P35710 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sox5P35710 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
Sox5P35710 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sox5P35710 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sox5P35710 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sox5P35710 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sox5P35710 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.63■□□□□ 0.89
Sox5P35710 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sox5P35710 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sox5P35710 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Sox5P35710 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sox5P35710 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sox5P35710 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox5P35710 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox5P35710 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox5P35710 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox5P35710 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.62■□□□□ 0.89
Sox5P35710 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.62■□□□□ 0.89
Sox5P35710 Gm43137-201ENSMUST00000198052 594 ntBASIC20.62■□□□□ 0.89
Sox5P35710 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sox5P35710 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox5P35710 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox5P35710 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox5P35710 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox5P35710 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox5P35710 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox5P35710 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox5P35710 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox5P35710 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox5P35710 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sox5P35710 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sox5P35710 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Sox5P35710 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.61■□□□□ 0.89
Sox5P35710 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.61■□□□□ 0.89
Sox5P35710 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.61■□□□□ 0.89
Sox5P35710 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.61■□□□□ 0.89
Sox5P35710 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sox5P35710 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.61■□□□□ 0.89
Sox5P35710 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sox5P35710 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sox5P35710 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sox5P35710 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sox5P35710 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sox5P35710 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Sox5P35710 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sox5P35710 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Sox5P35710 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sox5P35710 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sox5P35710 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Sox5P35710 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sox5P35710 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sox5P35710 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sox5P35710 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sox5P35710 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sox5P35710 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sox5P35710 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Sox5P35710 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.59■□□□□ 0.89
Sox5P35710 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sox5P35710 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sox5P35710 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Sox5P35710 Gm9847-201ENSMUST00000052528 599 ntBASIC20.59■□□□□ 0.89
Sox5P35710 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sox5P35710 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sox5P35710 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sox5P35710 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sox5P35710 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sox5P35710 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sox5P35710 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Sox5P35710 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
Sox5P35710 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sox5P35710 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.58■□□□□ 0.89
Sox5P35710 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.58■□□□□ 0.89
Sox5P35710 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sox5P35710 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sox5P35710 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sox5P35710 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sox5P35710 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sox5P35710 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Sox5P35710 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sox5P35710 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sox5P35710 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.57■□□□□ 0.88
Sox5P35710 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sox5P35710 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sox5P35710 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sox5P35710 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sox5P35710 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sox5P35710 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sox5P35710 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.56■□□□□ 0.88
Sox5P35710 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sox5P35710 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sox5P35710 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.56■□□□□ 0.88
Sox5P35710 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sox5P35710 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.55■□□□□ 0.88
Sox5P35710 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sox5P35710 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sox5P35710 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sox5P35710 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Sox5P35710 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms