Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.51■□□□□ 0.39
Sftpa1P35242 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Sftpa1P35242 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sftpa1P35242 Gm2399-201ENSMUST00000104944 225 ntBASIC17.51■□□□□ 0.39
Sftpa1P35242 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sftpa1P35242 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.51■□□□□ 0.39
Sftpa1P35242 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Sftpa1P35242 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sftpa1P35242 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sftpa1P35242 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sftpa1P35242 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sftpa1P35242 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sftpa1P35242 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sftpa1P35242 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Sftpa1P35242 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sftpa1P35242 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sftpa1P35242 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sftpa1P35242 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sftpa1P35242 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Sftpa1P35242 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Sftpa1P35242 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sftpa1P35242 Gm44549-201ENSMUST00000208351 577 ntBASIC17.5■□□□□ 0.39
Sftpa1P35242 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sftpa1P35242 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sftpa1P35242 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Sftpa1P35242 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Sftpa1P35242 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Sftpa1P35242 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.5■□□□□ 0.39
Sftpa1P35242 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sftpa1P35242 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sftpa1P35242 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sftpa1P35242 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Sftpa1P35242 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
Sftpa1P35242 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sftpa1P35242 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sftpa1P35242 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sftpa1P35242 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.49■□□□□ 0.39
Sftpa1P35242 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.49■□□□□ 0.39
Sftpa1P35242 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.49■□□□□ 0.39
Sftpa1P35242 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.49■□□□□ 0.39
Sftpa1P35242 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sftpa1P35242 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Sftpa1P35242 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.49■□□□□ 0.39
Sftpa1P35242 Gm18666-201ENSMUST00000190039 958 ntBASIC17.49■□□□□ 0.39
Sftpa1P35242 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.49■□□□□ 0.39
Sftpa1P35242 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sftpa1P35242 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Sftpa1P35242 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.49■□□□□ 0.39
Sftpa1P35242 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sftpa1P35242 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sftpa1P35242 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.49■□□□□ 0.39
Sftpa1P35242 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sftpa1P35242 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sftpa1P35242 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sftpa1P35242 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sftpa1P35242 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sftpa1P35242 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.48■□□□□ 0.39
Sftpa1P35242 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sftpa1P35242 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.48■□□□□ 0.39
Sftpa1P35242 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.48■□□□□ 0.39
Sftpa1P35242 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sftpa1P35242 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sftpa1P35242 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sftpa1P35242 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.48■□□□□ 0.39
Sftpa1P35242 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sftpa1P35242 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Sftpa1P35242 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.47■□□□□ 0.39
Sftpa1P35242 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.47■□□□□ 0.39
Sftpa1P35242 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.47■□□□□ 0.39
Sftpa1P35242 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sftpa1P35242 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Sftpa1P35242 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sftpa1P35242 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sftpa1P35242 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.47■□□□□ 0.39
Sftpa1P35242 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sftpa1P35242 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sftpa1P35242 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sftpa1P35242 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sftpa1P35242 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sftpa1P35242 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sftpa1P35242 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sftpa1P35242 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sftpa1P35242 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sftpa1P35242 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.46■□□□□ 0.39
Sftpa1P35242 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sftpa1P35242 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sftpa1P35242 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.46■□□□□ 0.39
Sftpa1P35242 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.46■□□□□ 0.39
Sftpa1P35242 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.46■□□□□ 0.39
Sftpa1P35242 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sftpa1P35242 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sftpa1P35242 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sftpa1P35242 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sftpa1P35242 Gm9987-201ENSMUST00000069768 567 ntBASIC17.46■□□□□ 0.39
Sftpa1P35242 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sftpa1P35242 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sftpa1P35242 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.38
Sftpa1P35242 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sftpa1P35242 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Sftpa1P35242 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms