Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Slc6a1P31648 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Slc6a1P31648 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Slc6a1P31648 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Slc6a1P31648 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Slc6a1P31648 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Slc6a1P31648 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Slc6a1P31648 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Slc6a1P31648 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Slc6a1P31648 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Slc6a1P31648 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Slc6a1P31648 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Slc6a1P31648 Gm15039-201ENSMUST00000118914 875 ntBASIC16.22■□□□□ 0.19
Slc6a1P31648 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.22■□□□□ 0.19
Slc6a1P31648 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.22■□□□□ 0.19
Slc6a1P31648 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Slc6a1P31648 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Slc6a1P31648 Gm13241-201ENSMUST00000094493 780 ntBASIC16.22■□□□□ 0.19
Slc6a1P31648 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Slc6a1P31648 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Slc6a1P31648 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Slc6a1P31648 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Slc6a1P31648 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Slc6a1P31648 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Slc6a1P31648 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Slc6a1P31648 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Slc6a1P31648 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Slc6a1P31648 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slc6a1P31648 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Slc6a1P31648 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slc6a1P31648 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Slc6a1P31648 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Slc6a1P31648 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slc6a1P31648 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slc6a1P31648 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slc6a1P31648 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
Slc6a1P31648 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slc6a1P31648 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slc6a1P31648 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Slc6a1P31648 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.21■□□□□ 0.18
Slc6a1P31648 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Slc6a1P31648 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a1P31648 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a1P31648 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a1P31648 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a1P31648 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Slc6a1P31648 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a1P31648 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a1P31648 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a1P31648 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a1P31648 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a1P31648 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Slc6a1P31648 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a1P31648 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a1P31648 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a1P31648 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc6a1P31648 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a1P31648 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a1P31648 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a1P31648 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a1P31648 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a1P31648 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a1P31648 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Slc6a1P31648 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Slc6a1P31648 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a1P31648 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a1P31648 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
Slc6a1P31648 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a1P31648 Gm12922-201ENSMUST00000120626 809 ntBASIC16.19■□□□□ 0.18
Slc6a1P31648 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a1P31648 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a1P31648 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a1P31648 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Slc6a1P31648 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a1P31648 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a1P31648 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a1P31648 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a1P31648 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a1P31648 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a1P31648 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a1P31648 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a1P31648 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a1P31648 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a1P31648 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a1P31648 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.18■□□□□ 0.18
Slc6a1P31648 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a1P31648 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a1P31648 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.18■□□□□ 0.18
Slc6a1P31648 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a1P31648 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.17■□□□□ 0.18
Slc6a1P31648 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a1P31648 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a1P31648 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.17■□□□□ 0.18
Slc6a1P31648 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a1P31648 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a1P31648 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a1P31648 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.17■□□□□ 0.18
Slc6a1P31648 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
Slc6a1P31648 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a1P31648 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms