Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nfkb1P25799 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nfkb1P25799 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nfkb1P25799 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nfkb1P25799 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Nfkb1P25799 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nfkb1P25799 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nfkb1P25799 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
Nfkb1P25799 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Nfkb1P25799 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Nfkb1P25799 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nfkb1P25799 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nfkb1P25799 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nfkb1P25799 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nfkb1P25799 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Nfkb1P25799 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nfkb1P25799 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.39■□□□□ 0.69
Nfkb1P25799 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nfkb1P25799 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Nfkb1P25799 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nfkb1P25799 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Nfkb1P25799 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nfkb1P25799 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nfkb1P25799 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Nfkb1P25799 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nfkb1P25799 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Nfkb1P25799 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nfkb1P25799 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nfkb1P25799 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Nfkb1P25799 Gm10653-202ENSMUST00000139570 835 ntBASIC19.38■□□□□ 0.69
Nfkb1P25799 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nfkb1P25799 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nfkb1P25799 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.38■□□□□ 0.69
Nfkb1P25799 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Nfkb1P25799 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nfkb1P25799 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nfkb1P25799 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nfkb1P25799 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nfkb1P25799 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nfkb1P25799 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Nfkb1P25799 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Nfkb1P25799 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.37■□□□□ 0.69
Nfkb1P25799 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.37■□□□□ 0.69
Nfkb1P25799 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.37■□□□□ 0.69
Nfkb1P25799 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.37■□□□□ 0.69
Nfkb1P25799 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nfkb1P25799 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nfkb1P25799 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nfkb1P25799 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nfkb1P25799 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nfkb1P25799 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nfkb1P25799 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.36■□□□□ 0.69
Nfkb1P25799 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nfkb1P25799 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.36■□□□□ 0.69
Nfkb1P25799 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nfkb1P25799 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nfkb1P25799 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Nfkb1P25799 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nfkb1P25799 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Nfkb1P25799 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
Nfkb1P25799 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.36■□□□□ 0.69
Nfkb1P25799 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Nfkb1P25799 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.36■□□□□ 0.69
Nfkb1P25799 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nfkb1P25799 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Nfkb1P25799 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Nfkb1P25799 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nfkb1P25799 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nfkb1P25799 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nfkb1P25799 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nfkb1P25799 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Nfkb1P25799 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nfkb1P25799 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nfkb1P25799 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nfkb1P25799 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nfkb1P25799 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.35■□□□□ 0.69
Nfkb1P25799 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nfkb1P25799 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nfkb1P25799 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nfkb1P25799 Gm12527-201ENSMUST00000117967 564 ntBASIC19.34■□□□□ 0.69
Nfkb1P25799 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.34■□□□□ 0.69
Nfkb1P25799 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nfkb1P25799 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nfkb1P25799 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nfkb1P25799 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nfkb1P25799 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
Nfkb1P25799 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nfkb1P25799 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.33■□□□□ 0.68
Nfkb1P25799 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Nfkb1P25799 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nfkb1P25799 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nfkb1P25799 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nfkb1P25799 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Nfkb1P25799 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.33■□□□□ 0.68
Nfkb1P25799 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nfkb1P25799 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.32■□□□□ 0.68
Nfkb1P25799 Iqck-206ENSMUST00000208658 2891 ntBASIC19.32■□□□□ 0.68
Nfkb1P25799 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Nfkb1P25799 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Nfkb1P25799 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms