Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Pde6bP23440 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Pde6bP23440 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pde6bP23440 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pde6bP23440 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pde6bP23440 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pde6bP23440 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Pde6bP23440 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Pde6bP23440 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pde6bP23440 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pde6bP23440 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
Pde6bP23440 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pde6bP23440 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pde6bP23440 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Pde6bP23440 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pde6bP23440 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Pde6bP23440 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pde6bP23440 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pde6bP23440 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pde6bP23440 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pde6bP23440 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Pde6bP23440 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.52■□□□□ 0.88
Pde6bP23440 Gm20049-201ENSMUST00000219950 730 ntBASIC20.52■□□□□ 0.88
Pde6bP23440 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pde6bP23440 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pde6bP23440 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pde6bP23440 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pde6bP23440 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Pde6bP23440 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Pde6bP23440 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
Pde6bP23440 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.51■□□□□ 0.87
Pde6bP23440 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
Pde6bP23440 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.5■□□□□ 0.87
Pde6bP23440 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pde6bP23440 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pde6bP23440 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pde6bP23440 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Pde6bP23440 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pde6bP23440 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Pde6bP23440 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.5■□□□□ 0.87
Pde6bP23440 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pde6bP23440 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pde6bP23440 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pde6bP23440 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Pde6bP23440 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.49■□□□□ 0.87
Pde6bP23440 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.49■□□□□ 0.87
Pde6bP23440 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Pde6bP23440 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pde6bP23440 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pde6bP23440 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Pde6bP23440 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Pde6bP23440 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.48■□□□□ 0.87
Pde6bP23440 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.48■□□□□ 0.87
Pde6bP23440 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pde6bP23440 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pde6bP23440 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pde6bP23440 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pde6bP23440 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.48■□□□□ 0.87
Pde6bP23440 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pde6bP23440 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.47■□□□□ 0.87
Pde6bP23440 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.47■□□□□ 0.87
Pde6bP23440 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pde6bP23440 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pde6bP23440 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Pde6bP23440 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pde6bP23440 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.47■□□□□ 0.87
Pde6bP23440 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pde6bP23440 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pde6bP23440 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pde6bP23440 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Pde6bP23440 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pde6bP23440 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pde6bP23440 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pde6bP23440 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pde6bP23440 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
Pde6bP23440 Gm13168-201ENSMUST00000121771 632 ntBASIC20.46■□□□□ 0.87
Pde6bP23440 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Pde6bP23440 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Pde6bP23440 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.46■□□□□ 0.87
Pde6bP23440 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.46■□□□□ 0.87
Pde6bP23440 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pde6bP23440 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pde6bP23440 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pde6bP23440 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pde6bP23440 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.46■□□□□ 0.87
Pde6bP23440 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pde6bP23440 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Pde6bP23440 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Pde6bP23440 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pde6bP23440 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pde6bP23440 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pde6bP23440 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pde6bP23440 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.45■□□□□ 0.86
Pde6bP23440 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.45■□□□□ 0.86
Pde6bP23440 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pde6bP23440 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
Pde6bP23440 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pde6bP23440 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pde6bP23440 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pde6bP23440 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms