Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Tnfrsf9P20334 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf9P20334 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Tnfrsf9P20334 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf9P20334 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf9P20334 Gm34220-201ENSMUST00000223001 2709 ntBASIC15.27■□□□□ 0.04
Tnfrsf9P20334 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf9P20334 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf9P20334 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf9P20334 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
Tnfrsf9P20334 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf9P20334 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf9P20334 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf9P20334 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf9P20334 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.27■□□□□ 0.03
Tnfrsf9P20334 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf9P20334 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf9P20334 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Tnfrsf9P20334 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf9P20334 Golph3-202ENSMUST00000226517 2359 ntBASIC15.26■□□□□ 0.03
Tnfrsf9P20334 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf9P20334 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Tnfrsf9P20334 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC15.26■□□□□ 0.03
Tnfrsf9P20334 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf9P20334 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf9P20334 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC15.26■□□□□ 0.03
Tnfrsf9P20334 Gm27801-201ENSMUST00000184174 223 ntBASIC15.26■□□□□ 0.03
Tnfrsf9P20334 Gm8520-201ENSMUST00000186517 868 ntBASIC15.26■□□□□ 0.03
Tnfrsf9P20334 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.26■□□□□ 0.03
Tnfrsf9P20334 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf9P20334 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Tnfrsf9P20334 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf9P20334 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf9P20334 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf9P20334 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Tnfrsf9P20334 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf9P20334 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf9P20334 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Tnfrsf9P20334 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf9P20334 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Tnfrsf9P20334 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf9P20334 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf9P20334 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC15.25■□□□□ 0.03
Tnfrsf9P20334 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Tnfrsf9P20334 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf9P20334 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf9P20334 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Tnfrsf9P20334 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf9P20334 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf9P20334 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf9P20334 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf9P20334 AC122428.2-201ENSMUST00000216321 1832 ntBASIC15.24■□□□□ 0.03
Tnfrsf9P20334 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Tnfrsf9P20334 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf9P20334 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf9P20334 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf9P20334 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.24■□□□□ 0.03
Tnfrsf9P20334 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf9P20334 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf9P20334 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf9P20334 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf9P20334 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf9P20334 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf9P20334 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf9P20334 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Tnfrsf9P20334 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Tnfrsf9P20334 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf9P20334 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf9P20334 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf9P20334 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Tnfrsf9P20334 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf9P20334 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Tnfrsf9P20334 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf9P20334 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf9P20334 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf9P20334 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf9P20334 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.23■□□□□ 0.03
Tnfrsf9P20334 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.23■□□□□ 0.03
Tnfrsf9P20334 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf9P20334 Gm5408-201ENSMUST00000197998 747 ntBASIC15.23■□□□□ 0.03
Tnfrsf9P20334 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Tnfrsf9P20334 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.23■□□□□ 0.03
Tnfrsf9P20334 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf9P20334 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf9P20334 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf9P20334 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.23■□□□□ 0.03
Tnfrsf9P20334 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf9P20334 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf9P20334 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf9P20334 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf9P20334 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Tnfrsf9P20334 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf9P20334 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf9P20334 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfrsf9P20334 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfrsf9P20334 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfrsf9P20334 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.22■□□□□ 0.03
Tnfrsf9P20334 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfrsf9P20334 Gm13168-201ENSMUST00000121771 632 ntBASIC15.22■□□□□ 0.03
Tnfrsf9P20334 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms