Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TP20293 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TP20293 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TP20293 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TP20293 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TP20293 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TP20293 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TP20293 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TP20293 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TP20293 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TP20293 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TP20293 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TP20293 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
TP20293 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TP20293 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TP20293 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TP20293 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TP20293 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
TP20293 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TP20293 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TP20293 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TP20293 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TP20293 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.67■□□□□ 0.42
TP20293 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.67■□□□□ 0.42
TP20293 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TP20293 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.67■□□□□ 0.42
TP20293 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TP20293 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TP20293 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TP20293 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.66■□□□□ 0.42
TP20293 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TP20293 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TP20293 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.66■□□□□ 0.42
TP20293 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.66■□□□□ 0.42
TP20293 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.66■□□□□ 0.42
TP20293 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.66■□□□□ 0.42
TP20293 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TP20293 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TP20293 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TP20293 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
TP20293 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TP20293 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TP20293 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TP20293 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TP20293 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TP20293 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TP20293 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TP20293 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.65■□□□□ 0.42
TP20293 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.65■□□□□ 0.42
TP20293 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
TP20293 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
TP20293 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TP20293 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.65■□□□□ 0.42
TP20293 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TP20293 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TP20293 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TP20293 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.65■□□□□ 0.42
TP20293 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TP20293 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TP20293 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TP20293 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TP20293 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TP20293 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TP20293 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TP20293 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TP20293 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TP20293 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
TP20293 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TP20293 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TP20293 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TP20293 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TP20293 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TP20293 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
TP20293 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.64■□□□□ 0.41
TP20293 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TP20293 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TP20293 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
TP20293 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TP20293 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TP20293 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TP20293 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TP20293 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TP20293 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TP20293 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TP20293 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TP20293 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.63■□□□□ 0.41
TP20293 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.63■□□□□ 0.41
TP20293 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TP20293 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TP20293 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.63■□□□□ 0.41
TP20293 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TP20293 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TP20293 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.63■□□□□ 0.41
TP20293 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TP20293 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TP20293 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TP20293 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TP20293 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
TP20293 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TP20293 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms