Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn1P18608 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn1P18608 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn1P18608 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn1P18608 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn1P18608 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.28■□□□□ 0.36
Hmgn1P18608 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn1P18608 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn1P18608 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn1P18608 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn1P18608 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn1P18608 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn1P18608 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn1P18608 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmgn1P18608 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmgn1P18608 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hmgn1P18608 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hmgn1P18608 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmgn1P18608 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmgn1P18608 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.27■□□□□ 0.36
Hmgn1P18608 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmgn1P18608 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hmgn1P18608 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Hmgn1P18608 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.27■□□□□ 0.35
Hmgn1P18608 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hmgn1P18608 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Hmgn1P18608 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hmgn1P18608 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hmgn1P18608 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hmgn1P18608 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Hmgn1P18608 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.27■□□□□ 0.35
Hmgn1P18608 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn1P18608 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Hmgn1P18608 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn1P18608 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn1P18608 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn1P18608 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn1P18608 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Hmgn1P18608 Gm5812-201ENSMUST00000061073 957 ntBASIC17.26■□□□□ 0.35
Hmgn1P18608 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Hmgn1P18608 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn1P18608 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn1P18608 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn1P18608 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn1P18608 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgn1P18608 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Hmgn1P18608 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgn1P18608 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgn1P18608 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.25■□□□□ 0.35
Hmgn1P18608 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgn1P18608 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgn1P18608 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgn1P18608 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgn1P18608 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgn1P18608 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.25■□□□□ 0.35
Hmgn1P18608 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgn1P18608 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgn1P18608 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgn1P18608 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.24■□□□□ 0.35
Hmgn1P18608 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgn1P18608 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgn1P18608 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgn1P18608 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgn1P18608 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.24■□□□□ 0.35
Hmgn1P18608 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgn1P18608 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgn1P18608 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.24■□□□□ 0.35
Hmgn1P18608 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.24■□□□□ 0.35
Hmgn1P18608 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgn1P18608 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgn1P18608 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Hmgn1P18608 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgn1P18608 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgn1P18608 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgn1P18608 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
Hmgn1P18608 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Hmgn1P18608 Gm15546-201ENSMUST00000122095 826 ntBASIC17.23■□□□□ 0.35
Hmgn1P18608 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgn1P18608 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgn1P18608 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgn1P18608 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgn1P18608 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgn1P18608 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Hmgn1P18608 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgn1P18608 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.22■□□□□ 0.35
Hmgn1P18608 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgn1P18608 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgn1P18608 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgn1P18608 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgn1P18608 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgn1P18608 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgn1P18608 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgn1P18608 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.22■□□□□ 0.35
Hmgn1P18608 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgn1P18608 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgn1P18608 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgn1P18608 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.22■□□□□ 0.35
Hmgn1P18608 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Hmgn1P18608 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgn1P18608 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms