Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cd44P15379 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
Cd44P15379 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.88■□□□□ 0.77
Cd44P15379 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.88■□□□□ 0.77
Cd44P15379 Gm9847-201ENSMUST00000052528 599 ntBASIC19.88■□□□□ 0.77
Cd44P15379 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cd44P15379 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cd44P15379 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cd44P15379 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cd44P15379 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cd44P15379 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.87■□□□□ 0.77
Cd44P15379 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.87■□□□□ 0.77
Cd44P15379 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Cd44P15379 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cd44P15379 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.87■□□□□ 0.77
Cd44P15379 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.87■□□□□ 0.77
Cd44P15379 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.87■□□□□ 0.77
Cd44P15379 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.87■□□□□ 0.77
Cd44P15379 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cd44P15379 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cd44P15379 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cd44P15379 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cd44P15379 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cd44P15379 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Cd44P15379 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cd44P15379 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.86■□□□□ 0.77
Cd44P15379 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cd44P15379 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Cd44P15379 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cd44P15379 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cd44P15379 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cd44P15379 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cd44P15379 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cd44P15379 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cd44P15379 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.85■□□□□ 0.77
Cd44P15379 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Cd44P15379 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cd44P15379 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cd44P15379 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cd44P15379 Gm21956-201ENSMUST00000179946 522 ntBASIC19.85■□□□□ 0.77
Cd44P15379 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.85■□□□□ 0.77
Cd44P15379 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cd44P15379 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cd44P15379 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Cd44P15379 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.85■□□□□ 0.77
Cd44P15379 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cd44P15379 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cd44P15379 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cd44P15379 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cd44P15379 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cd44P15379 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cd44P15379 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cd44P15379 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cd44P15379 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.84■□□□□ 0.77
Cd44P15379 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.84■□□□□ 0.77
Cd44P15379 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cd44P15379 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cd44P15379 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cd44P15379 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Cd44P15379 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cd44P15379 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cd44P15379 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cd44P15379 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cd44P15379 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.83■□□□□ 0.77
Cd44P15379 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cd44P15379 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cd44P15379 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cd44P15379 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Cd44P15379 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cd44P15379 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.83■□□□□ 0.77
Cd44P15379 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cd44P15379 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cd44P15379 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cd44P15379 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Cd44P15379 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cd44P15379 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cd44P15379 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cd44P15379 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cd44P15379 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.82■□□□□ 0.76
Cd44P15379 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.82■□□□□ 0.76
Cd44P15379 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.82■□□□□ 0.76
Cd44P15379 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cd44P15379 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cd44P15379 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cd44P15379 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.82■□□□□ 0.76
Cd44P15379 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.82■□□□□ 0.76
Cd44P15379 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cd44P15379 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cd44P15379 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cd44P15379 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cd44P15379 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cd44P15379 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cd44P15379 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cd44P15379 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cd44P15379 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.81■□□□□ 0.76
Cd44P15379 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cd44P15379 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cd44P15379 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Cd44P15379 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cd44P15379 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms