Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smim1P0C8K7 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smim1P0C8K7 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Smim1P0C8K7 Zcchc6-207ENSMUST00000225576 2499 ntBASIC13.05□□□□□ -0.32
Smim1P0C8K7 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Smim1P0C8K7 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smim1P0C8K7 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smim1P0C8K7 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smim1P0C8K7 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smim1P0C8K7 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smim1P0C8K7 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC13.05□□□□□ -0.32
Smim1P0C8K7 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Smim1P0C8K7 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smim1P0C8K7 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smim1P0C8K7 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smim1P0C8K7 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smim1P0C8K7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smim1P0C8K7 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smim1P0C8K7 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smim1P0C8K7 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC13.05□□□□□ -0.32
Smim1P0C8K7 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smim1P0C8K7 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smim1P0C8K7 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smim1P0C8K7 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smim1P0C8K7 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smim1P0C8K7 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smim1P0C8K7 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smim1P0C8K7 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smim1P0C8K7 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smim1P0C8K7 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smim1P0C8K7 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smim1P0C8K7 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smim1P0C8K7 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smim1P0C8K7 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smim1P0C8K7 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smim1P0C8K7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smim1P0C8K7 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.04□□□□□ -0.32
Smim1P0C8K7 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smim1P0C8K7 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smim1P0C8K7 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smim1P0C8K7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smim1P0C8K7 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Smim1P0C8K7 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smim1P0C8K7 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smim1P0C8K7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smim1P0C8K7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smim1P0C8K7 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Smim1P0C8K7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Smim1P0C8K7 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smim1P0C8K7 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smim1P0C8K7 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smim1P0C8K7 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smim1P0C8K7 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smim1P0C8K7 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smim1P0C8K7 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Smim1P0C8K7 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smim1P0C8K7 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Smim1P0C8K7 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smim1P0C8K7 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Smim1P0C8K7 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC13.03□□□□□ -0.32
Smim1P0C8K7 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Smim1P0C8K7 Gm37194-201ENSMUST00000193092 3031 ntBASIC13.03□□□□□ -0.32
Smim1P0C8K7 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smim1P0C8K7 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Smim1P0C8K7 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smim1P0C8K7 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Smim1P0C8K7 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smim1P0C8K7 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smim1P0C8K7 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smim1P0C8K7 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smim1P0C8K7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smim1P0C8K7 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smim1P0C8K7 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC13.02□□□□□ -0.32
Smim1P0C8K7 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Smim1P0C8K7 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smim1P0C8K7 Gm38308-201ENSMUST00000194934 1809 ntBASIC13.02□□□□□ -0.32
Smim1P0C8K7 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smim1P0C8K7 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Smim1P0C8K7 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smim1P0C8K7 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smim1P0C8K7 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC13.02□□□□□ -0.33
Smim1P0C8K7 Mir6236-201ENSMUST00000184437 123 ntBASIC13.02□□□□□ -0.33
Smim1P0C8K7 Gm9939-201ENSMUST00000067161 1154 ntBASIC13.02□□□□□ -0.33
Smim1P0C8K7 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smim1P0C8K7 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smim1P0C8K7 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smim1P0C8K7 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smim1P0C8K7 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smim1P0C8K7 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smim1P0C8K7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smim1P0C8K7 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smim1P0C8K7 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smim1P0C8K7 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smim1P0C8K7 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smim1P0C8K7 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smim1P0C8K7 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smim1P0C8K7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smim1P0C8K7 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC13.01□□□□□ -0.33
Smim1P0C8K7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smim1P0C8K7 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms