Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
H3f3cP02301 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
H3f3cP02301 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H3f3cP02301 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
H3f3cP02301 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
H3f3cP02301 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
H3f3cP02301 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
H3f3cP02301 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
H3f3cP02301 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.15■□□□□ 0.18
H3f3cP02301 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
H3f3cP02301 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
H3f3cP02301 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
H3f3cP02301 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
H3f3cP02301 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
H3f3cP02301 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
H3f3cP02301 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
H3f3cP02301 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
H3f3cP02301 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.14■□□□□ 0.17
H3f3cP02301 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H3f3cP02301 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H3f3cP02301 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
H3f3cP02301 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
H3f3cP02301 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H3f3cP02301 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H3f3cP02301 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
H3f3cP02301 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
H3f3cP02301 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
H3f3cP02301 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
H3f3cP02301 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
H3f3cP02301 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
H3f3cP02301 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
H3f3cP02301 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
H3f3cP02301 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
H3f3cP02301 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.14■□□□□ 0.17
H3f3cP02301 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.14■□□□□ 0.17
H3f3cP02301 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
H3f3cP02301 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
H3f3cP02301 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.13■□□□□ 0.17
H3f3cP02301 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H3f3cP02301 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H3f3cP02301 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
H3f3cP02301 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
H3f3cP02301 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H3f3cP02301 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
H3f3cP02301 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.13■□□□□ 0.17
H3f3cP02301 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H3f3cP02301 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H3f3cP02301 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
H3f3cP02301 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
H3f3cP02301 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
H3f3cP02301 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
H3f3cP02301 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
H3f3cP02301 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
H3f3cP02301 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.12■□□□□ 0.17
H3f3cP02301 Gm8495-201ENSMUST00000188740 694 ntBASIC16.12■□□□□ 0.17
H3f3cP02301 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.12■□□□□ 0.17
H3f3cP02301 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.12■□□□□ 0.17
H3f3cP02301 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.12■□□□□ 0.17
H3f3cP02301 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
H3f3cP02301 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
H3f3cP02301 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
H3f3cP02301 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
H3f3cP02301 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
H3f3cP02301 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
H3f3cP02301 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
H3f3cP02301 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
H3f3cP02301 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.12■□□□□ 0.17
H3f3cP02301 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
H3f3cP02301 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
H3f3cP02301 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
H3f3cP02301 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
H3f3cP02301 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
H3f3cP02301 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
H3f3cP02301 Gm7860-201ENSMUST00000121190 879 ntBASIC16.11■□□□□ 0.17
H3f3cP02301 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
H3f3cP02301 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
H3f3cP02301 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
H3f3cP02301 Gm5874-201ENSMUST00000096101 508 ntBASIC16.11■□□□□ 0.17
H3f3cP02301 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
H3f3cP02301 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
H3f3cP02301 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
H3f3cP02301 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
H3f3cP02301 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
H3f3cP02301 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
H3f3cP02301 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
H3f3cP02301 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H3f3cP02301 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
H3f3cP02301 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
H3f3cP02301 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H3f3cP02301 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H3f3cP02301 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
H3f3cP02301 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H3f3cP02301 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
H3f3cP02301 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H3f3cP02301 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
H3f3cP02301 Gm9988-201ENSMUST00000069786 435 ntBASIC16.1■□□□□ 0.17
H3f3cP02301 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H3f3cP02301 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
H3f3cP02301 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
H3f3cP02301 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms