Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igh-VJ558P01758 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Igh-VJ558P01758 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.41■□□□□ 0.22
Igh-VJ558P01758 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igh-VJ558P01758 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Igh-VJ558P01758 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.41■□□□□ 0.22
Igh-VJ558P01758 Gm38205-201ENSMUST00000192243 258 ntBASIC16.41■□□□□ 0.22
Igh-VJ558P01758 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Igh-VJ558P01758 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igh-VJ558P01758 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igh-VJ558P01758 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igh-VJ558P01758 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igh-VJ558P01758 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igh-VJ558P01758 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igh-VJ558P01758 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igh-VJ558P01758 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Igh-VJ558P01758 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Igh-VJ558P01758 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.4■□□□□ 0.22
Igh-VJ558P01758 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Igh-VJ558P01758 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igh-VJ558P01758 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igh-VJ558P01758 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.4■□□□□ 0.22
Igh-VJ558P01758 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.4■□□□□ 0.22
Igh-VJ558P01758 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.4■□□□□ 0.22
Igh-VJ558P01758 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igh-VJ558P01758 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.39■□□□□ 0.22
Igh-VJ558P01758 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igh-VJ558P01758 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igh-VJ558P01758 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igh-VJ558P01758 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igh-VJ558P01758 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igh-VJ558P01758 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igh-VJ558P01758 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igh-VJ558P01758 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Igh-VJ558P01758 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igh-VJ558P01758 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igh-VJ558P01758 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igh-VJ558P01758 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igh-VJ558P01758 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Igh-VJ558P01758 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.39■□□□□ 0.21
Igh-VJ558P01758 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igh-VJ558P01758 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igh-VJ558P01758 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Igh-VJ558P01758 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Igh-VJ558P01758 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Igh-VJ558P01758 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.38■□□□□ 0.21
Igh-VJ558P01758 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Igh-VJ558P01758 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Igh-VJ558P01758 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Igh-VJ558P01758 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Igh-VJ558P01758 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Igh-VJ558P01758 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.38■□□□□ 0.21
Igh-VJ558P01758 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Igh-VJ558P01758 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Igh-VJ558P01758 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Igh-VJ558P01758 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Igh-VJ558P01758 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Igh-VJ558P01758 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Igh-VJ558P01758 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Igh-VJ558P01758 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.37■□□□□ 0.21
Igh-VJ558P01758 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.37■□□□□ 0.21
Igh-VJ558P01758 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Igh-VJ558P01758 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Igh-VJ558P01758 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Igh-VJ558P01758 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Igh-VJ558P01758 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Igh-VJ558P01758 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.37■□□□□ 0.21
Igh-VJ558P01758 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Igh-VJ558P01758 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Igh-VJ558P01758 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Igh-VJ558P01758 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Igh-VJ558P01758 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Igh-VJ558P01758 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.36■□□□□ 0.21
Igh-VJ558P01758 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Igh-VJ558P01758 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Igh-VJ558P01758 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Igh-VJ558P01758 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Igh-VJ558P01758 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Igh-VJ558P01758 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Igh-VJ558P01758 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.36■□□□□ 0.21
Igh-VJ558P01758 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Igh-VJ558P01758 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Igh-VJ558P01758 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Igh-VJ558P01758 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Igh-VJ558P01758 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Igh-VJ558P01758 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Igh-VJ558P01758 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Igh-VJ558P01758 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Igh-VJ558P01758 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Igh-VJ558P01758 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Igh-VJ558P01758 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.35■□□□□ 0.21
Igh-VJ558P01758 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Igh-VJ558P01758 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Igh-VJ558P01758 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Igh-VJ558P01758 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Igh-VJ558P01758 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Igh-VJ558P01758 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Igh-VJ558P01758 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Igh-VJ558P01758 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Igh-VJ558P01758 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms