Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hdac3O88895 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hdac3O88895 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hdac3O88895 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hdac3O88895 Gm45417-201ENSMUST00000209533 758 ntBASIC16.82■□□□□ 0.28
Hdac3O88895 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hdac3O88895 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hdac3O88895 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hdac3O88895 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hdac3O88895 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hdac3O88895 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.81■□□□□ 0.28
Hdac3O88895 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.81■□□□□ 0.28
Hdac3O88895 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hdac3O88895 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hdac3O88895 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hdac3O88895 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hdac3O88895 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hdac3O88895 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hdac3O88895 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.81■□□□□ 0.28
Hdac3O88895 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.81■□□□□ 0.28
Hdac3O88895 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Hdac3O88895 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hdac3O88895 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.81■□□□□ 0.28
Hdac3O88895 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.81■□□□□ 0.28
Hdac3O88895 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hdac3O88895 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.81■□□□□ 0.28
Hdac3O88895 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hdac3O88895 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hdac3O88895 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Hdac3O88895 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hdac3O88895 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.8■□□□□ 0.28
Hdac3O88895 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.8■□□□□ 0.28
Hdac3O88895 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Hdac3O88895 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.8■□□□□ 0.28
Hdac3O88895 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hdac3O88895 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hdac3O88895 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.8■□□□□ 0.28
Hdac3O88895 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Hdac3O88895 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Hdac3O88895 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Hdac3O88895 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hdac3O88895 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hdac3O88895 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Hdac3O88895 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hdac3O88895 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hdac3O88895 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Hdac3O88895 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.79■□□□□ 0.28
Hdac3O88895 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hdac3O88895 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hdac3O88895 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Hdac3O88895 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Hdac3O88895 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hdac3O88895 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hdac3O88895 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hdac3O88895 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Hdac3O88895 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.79■□□□□ 0.28
Hdac3O88895 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hdac3O88895 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Hdac3O88895 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hdac3O88895 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hdac3O88895 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Hdac3O88895 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Hdac3O88895 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hdac3O88895 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Hdac3O88895 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hdac3O88895 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Hdac3O88895 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Hdac3O88895 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Hdac3O88895 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.78■□□□□ 0.28
Hdac3O88895 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hdac3O88895 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hdac3O88895 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hdac3O88895 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Hdac3O88895 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hdac3O88895 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Hdac3O88895 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hdac3O88895 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hdac3O88895 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Hdac3O88895 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Hdac3O88895 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Hdac3O88895 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.77■□□□□ 0.28
Hdac3O88895 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hdac3O88895 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hdac3O88895 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Hdac3O88895 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Hdac3O88895 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hdac3O88895 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hdac3O88895 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hdac3O88895 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hdac3O88895 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hdac3O88895 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Hdac3O88895 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hdac3O88895 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hdac3O88895 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hdac3O88895 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hdac3O88895 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hdac3O88895 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Hdac3O88895 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hdac3O88895 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hdac3O88895 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms