Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CcnkO88874 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CcnkO88874 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CcnkO88874 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CcnkO88874 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CcnkO88874 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.73■□□□□ 0.27
CcnkO88874 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC16.73■□□□□ 0.27
CcnkO88874 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CcnkO88874 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CcnkO88874 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CcnkO88874 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.73■□□□□ 0.27
CcnkO88874 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CcnkO88874 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CcnkO88874 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CcnkO88874 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.73■□□□□ 0.27
CcnkO88874 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CcnkO88874 Gm9847-201ENSMUST00000052528 599 ntBASIC16.73■□□□□ 0.27
CcnkO88874 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CcnkO88874 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CcnkO88874 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CcnkO88874 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CcnkO88874 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CcnkO88874 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CcnkO88874 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.73■□□□□ 0.27
CcnkO88874 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CcnkO88874 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.73■□□□□ 0.27
CcnkO88874 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CcnkO88874 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CcnkO88874 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.72■□□□□ 0.27
CcnkO88874 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CcnkO88874 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CcnkO88874 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CcnkO88874 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.72■□□□□ 0.27
CcnkO88874 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CcnkO88874 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CcnkO88874 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CcnkO88874 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CcnkO88874 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CcnkO88874 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CcnkO88874 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CcnkO88874 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
CcnkO88874 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CcnkO88874 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CcnkO88874 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CcnkO88874 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CcnkO88874 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CcnkO88874 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CcnkO88874 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CcnkO88874 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CcnkO88874 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CcnkO88874 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.7■□□□□ 0.26
CcnkO88874 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.7■□□□□ 0.26
CcnkO88874 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CcnkO88874 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.7■□□□□ 0.26
CcnkO88874 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CcnkO88874 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CcnkO88874 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.7■□□□□ 0.26
CcnkO88874 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.7■□□□□ 0.26
CcnkO88874 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CcnkO88874 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.7■□□□□ 0.26
CcnkO88874 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CcnkO88874 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CcnkO88874 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.69■□□□□ 0.26
CcnkO88874 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
CcnkO88874 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CcnkO88874 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CcnkO88874 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.69■□□□□ 0.26
CcnkO88874 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CcnkO88874 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CcnkO88874 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CcnkO88874 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CcnkO88874 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CcnkO88874 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CcnkO88874 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.69■□□□□ 0.26
CcnkO88874 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CcnkO88874 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CcnkO88874 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CcnkO88874 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CcnkO88874 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CcnkO88874 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CcnkO88874 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CcnkO88874 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CcnkO88874 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CcnkO88874 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CcnkO88874 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CcnkO88874 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CcnkO88874 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CcnkO88874 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.68■□□□□ 0.26
CcnkO88874 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CcnkO88874 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CcnkO88874 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CcnkO88874 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CcnkO88874 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.67■□□□□ 0.26
CcnkO88874 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CcnkO88874 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CcnkO88874 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CcnkO88874 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CcnkO88874 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CcnkO88874 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CcnkO88874 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms