Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ClppO88696 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
ClppO88696 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.33■□□□□ 0.52
ClppO88696 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.33■□□□□ 0.52
ClppO88696 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.33■□□□□ 0.52
ClppO88696 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
ClppO88696 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
ClppO88696 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ClppO88696 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ClppO88696 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
ClppO88696 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ClppO88696 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.33■□□□□ 0.52
ClppO88696 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.33■□□□□ 0.52
ClppO88696 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
ClppO88696 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ClppO88696 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ClppO88696 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.32■□□□□ 0.52
ClppO88696 Gm13146-201ENSMUST00000118508 780 ntBASIC18.32■□□□□ 0.52
ClppO88696 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.32■□□□□ 0.52
ClppO88696 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ClppO88696 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.32■□□□□ 0.52
ClppO88696 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ClppO88696 Golph3-205ENSMUST00000228671 2842 ntBASIC18.32■□□□□ 0.52
ClppO88696 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.32■□□□□ 0.52
ClppO88696 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ClppO88696 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ClppO88696 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ClppO88696 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ClppO88696 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ClppO88696 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ClppO88696 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ClppO88696 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ClppO88696 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ClppO88696 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ClppO88696 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ClppO88696 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ClppO88696 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ClppO88696 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ClppO88696 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClppO88696 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
ClppO88696 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ClppO88696 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClppO88696 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClppO88696 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClppO88696 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClppO88696 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.3■□□□□ 0.52
ClppO88696 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
ClppO88696 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClppO88696 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClppO88696 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClppO88696 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClppO88696 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
ClppO88696 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClppO88696 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClppO88696 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClppO88696 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClppO88696 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
ClppO88696 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ClppO88696 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClppO88696 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ClppO88696 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ClppO88696 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ClppO88696 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ClppO88696 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
ClppO88696 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.29■□□□□ 0.52
ClppO88696 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
ClppO88696 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ClppO88696 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ClppO88696 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ClppO88696 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ClppO88696 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ClppO88696 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ClppO88696 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ClppO88696 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ClppO88696 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.28■□□□□ 0.52
ClppO88696 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.28■□□□□ 0.52
ClppO88696 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ClppO88696 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ClppO88696 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ClppO88696 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ClppO88696 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.28■□□□□ 0.52
ClppO88696 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.28■□□□□ 0.52
ClppO88696 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.28■□□□□ 0.52
ClppO88696 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ClppO88696 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ClppO88696 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ClppO88696 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ClppO88696 AA386476-201ENSMUST00000098781 1665 ntBASIC18.28■□□□□ 0.52
ClppO88696 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ClppO88696 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ClppO88696 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
ClppO88696 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ClppO88696 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ClppO88696 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ClppO88696 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ClppO88696 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.27■□□□□ 0.52
ClppO88696 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ClppO88696 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
ClppO88696 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
ClppO88696 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms