Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Tnfrsf17O88472 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf17O88472 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf17O88472 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf17O88472 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.62■□□□□ 0.41
Tnfrsf17O88472 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf17O88472 Gm30025-201ENSMUST00000218555 728 ntBASIC17.62■□□□□ 0.41
Tnfrsf17O88472 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.62■□□□□ 0.41
Tnfrsf17O88472 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf17O88472 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf17O88472 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf17O88472 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf17O88472 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf17O88472 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf17O88472 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf17O88472 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf17O88472 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf17O88472 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf17O88472 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf17O88472 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf17O88472 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf17O88472 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf17O88472 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Tnfrsf17O88472 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf17O88472 Gm18101-201ENSMUST00000215769 548 ntBASIC17.61■□□□□ 0.41
Tnfrsf17O88472 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf17O88472 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf17O88472 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf17O88472 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf17O88472 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf17O88472 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf17O88472 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.61■□□□□ 0.41
Tnfrsf17O88472 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf17O88472 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf17O88472 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfrsf17O88472 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.6■□□□□ 0.41
Tnfrsf17O88472 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.6■□□□□ 0.41
Tnfrsf17O88472 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.6■□□□□ 0.41
Tnfrsf17O88472 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfrsf17O88472 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Tnfrsf17O88472 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfrsf17O88472 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfrsf17O88472 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfrsf17O88472 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf17O88472 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.59■□□□□ 0.41
Tnfrsf17O88472 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf17O88472 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.59■□□□□ 0.41
Tnfrsf17O88472 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.59■□□□□ 0.41
Tnfrsf17O88472 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Tnfrsf17O88472 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf17O88472 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf17O88472 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf17O88472 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf17O88472 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf17O88472 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tnfrsf17O88472 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.58■□□□□ 0.41
Tnfrsf17O88472 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tnfrsf17O88472 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tnfrsf17O88472 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tnfrsf17O88472 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfrsf17O88472 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfrsf17O88472 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfrsf17O88472 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfrsf17O88472 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfrsf17O88472 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Tnfrsf17O88472 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfrsf17O88472 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfrsf17O88472 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfrsf17O88472 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfrsf17O88472 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf17O88472 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf17O88472 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf17O88472 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf17O88472 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf17O88472 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.57■□□□□ 0.4
Tnfrsf17O88472 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Tnfrsf17O88472 Gm13559-201ENSMUST00000120476 863 ntBASIC17.57■□□□□ 0.4
Tnfrsf17O88472 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf17O88472 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.57■□□□□ 0.4
Tnfrsf17O88472 Gm21814-202ENSMUST00000203277 873 ntBASIC17.57■□□□□ 0.4
Tnfrsf17O88472 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf17O88472 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf17O88472 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf17O88472 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf17O88472 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf17O88472 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf17O88472 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf17O88472 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Tnfrsf17O88472 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.56■□□□□ 0.4
Tnfrsf17O88472 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf17O88472 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf17O88472 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Tnfrsf17O88472 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.56■□□□□ 0.4
Tnfrsf17O88472 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf17O88472 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf17O88472 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf17O88472 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf17O88472 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Tnfrsf17O88472 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf17O88472 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms