Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18■□□□□ 0.47
Tgfbr3O88393 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tgfbr3O88393 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tgfbr3O88393 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tgfbr3O88393 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Tgfbr3O88393 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18■□□□□ 0.47
Tgfbr3O88393 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tgfbr3O88393 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tgfbr3O88393 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tgfbr3O88393 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18■□□□□ 0.47
Tgfbr3O88393 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18■□□□□ 0.47
Tgfbr3O88393 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tgfbr3O88393 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Tgfbr3O88393 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tgfbr3O88393 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tgfbr3O88393 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Tgfbr3O88393 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tgfbr3O88393 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tgfbr3O88393 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Tgfbr3O88393 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tgfbr3O88393 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tgfbr3O88393 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Tgfbr3O88393 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.99■□□□□ 0.47
Tgfbr3O88393 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.99■□□□□ 0.47
Tgfbr3O88393 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.99■□□□□ 0.47
Tgfbr3O88393 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.99■□□□□ 0.47
Tgfbr3O88393 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Tgfbr3O88393 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tgfbr3O88393 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tgfbr3O88393 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tgfbr3O88393 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Tgfbr3O88393 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tgfbr3O88393 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tgfbr3O88393 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tgfbr3O88393 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Tgfbr3O88393 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Tgfbr3O88393 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.98■□□□□ 0.47
Tgfbr3O88393 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Tgfbr3O88393 Gm44549-201ENSMUST00000208351 577 ntBASIC17.98■□□□□ 0.47
Tgfbr3O88393 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.98■□□□□ 0.47
Tgfbr3O88393 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Tgfbr3O88393 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tgfbr3O88393 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Tgfbr3O88393 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.97■□□□□ 0.47
Tgfbr3O88393 Gm6576-201ENSMUST00000169678 883 ntBASIC17.97■□□□□ 0.47
Tgfbr3O88393 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tgfbr3O88393 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tgfbr3O88393 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tgfbr3O88393 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tgfbr3O88393 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tgfbr3O88393 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tgfbr3O88393 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tgfbr3O88393 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Tgfbr3O88393 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Tgfbr3O88393 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tgfbr3O88393 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Tgfbr3O88393 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tgfbr3O88393 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tgfbr3O88393 Gm11249-201ENSMUST00000117071 859 ntBASIC17.96■□□□□ 0.47
Tgfbr3O88393 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.96■□□□□ 0.47
Tgfbr3O88393 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.96■□□□□ 0.47
Tgfbr3O88393 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tgfbr3O88393 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tgfbr3O88393 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tgfbr3O88393 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Tgfbr3O88393 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tgfbr3O88393 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tgfbr3O88393 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Tgfbr3O88393 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tgfbr3O88393 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tgfbr3O88393 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.95■□□□□ 0.46
Tgfbr3O88393 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.95■□□□□ 0.46
Tgfbr3O88393 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.95■□□□□ 0.46
Tgfbr3O88393 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tgfbr3O88393 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tgfbr3O88393 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tgfbr3O88393 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tgfbr3O88393 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tgfbr3O88393 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Tgfbr3O88393 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tgfbr3O88393 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Tgfbr3O88393 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Tgfbr3O88393 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.94■□□□□ 0.46
Tgfbr3O88393 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.94■□□□□ 0.46
Tgfbr3O88393 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Tgfbr3O88393 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tgfbr3O88393 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Tgfbr3O88393 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tgfbr3O88393 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tgfbr3O88393 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Tgfbr3O88393 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tgfbr3O88393 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tgfbr3O88393 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tgfbr3O88393 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Tgfbr3O88393 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tgfbr3O88393 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Tgfbr3O88393 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tgfbr3O88393 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.93■□□□□ 0.46
Tgfbr3O88393 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tgfbr3O88393 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms