Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC11.52□□□□□ -0.57
Gm10139O88245 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm10139O88245 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Gm10139O88245 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Gm10139O88245 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Gm10139O88245 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm10139O88245 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10139O88245 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10139O88245 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10139O88245 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10139O88245 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10139O88245 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10139O88245 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC11.51□□□□□ -0.57
Gm10139O88245 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10139O88245 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10139O88245 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC11.51□□□□□ -0.57
Gm10139O88245 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10139O88245 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10139O88245 Smad6-203ENSMUST00000179458 273 ntBASIC11.51□□□□□ -0.57
Gm10139O88245 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10139O88245 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10139O88245 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC11.51□□□□□ -0.57
Gm10139O88245 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10139O88245 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Gm10139O88245 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10139O88245 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10139O88245 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10139O88245 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10139O88245 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm10139O88245 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10139O88245 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10139O88245 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10139O88245 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10139O88245 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Gm10139O88245 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10139O88245 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10139O88245 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10139O88245 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10139O88245 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC11.5□□□□□ -0.57
Gm10139O88245 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10139O88245 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC11.5□□□□□ -0.57
Gm10139O88245 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10139O88245 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10139O88245 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10139O88245 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10139O88245 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10139O88245 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10139O88245 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10139O88245 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10139O88245 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10139O88245 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10139O88245 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10139O88245 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10139O88245 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10139O88245 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10139O88245 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm10139O88245 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Gm10139O88245 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm10139O88245 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC11.49□□□□□ -0.57
Gm10139O88245 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm10139O88245 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Gm10139O88245 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Gm10139O88245 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC11.49□□□□□ -0.57
Gm10139O88245 Gm27801-201ENSMUST00000184174 223 ntBASIC11.49□□□□□ -0.57
Gm10139O88245 CT030146.1-201ENSMUST00000220919 217 ntBASIC11.49□□□□□ -0.57
Gm10139O88245 Gm13241-201ENSMUST00000094493 780 ntBASIC11.49□□□□□ -0.57
Gm10139O88245 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm10139O88245 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm10139O88245 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm10139O88245 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm10139O88245 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm10139O88245 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm10139O88245 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm10139O88245 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm10139O88245 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm10139O88245 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm10139O88245 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm10139O88245 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Gm10139O88245 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Gm10139O88245 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm10139O88245 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Gm10139O88245 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm10139O88245 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm10139O88245 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC11.48□□□□□ -0.57
Gm10139O88245 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Gm10139O88245 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm10139O88245 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Gm10139O88245 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm10139O88245 Gm21956-201ENSMUST00000179946 522 ntBASIC11.48□□□□□ -0.57
Gm10139O88245 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm10139O88245 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC11.48□□□□□ -0.57
Gm10139O88245 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm10139O88245 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Gm10139O88245 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm10139O88245 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm10139O88245 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm10139O88245 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC11.48□□□□□ -0.57
Gm10139O88245 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC11.48□□□□□ -0.57
Gm10139O88245 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Gm10139O88245 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms