Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdlim3O70209 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.11■□□□□ 0.33
Pdlim3O70209 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.11■□□□□ 0.33
Pdlim3O70209 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pdlim3O70209 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdlim3O70209 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdlim3O70209 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdlim3O70209 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdlim3O70209 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Pdlim3O70209 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Pdlim3O70209 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pdlim3O70209 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pdlim3O70209 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.1■□□□□ 0.33
Pdlim3O70209 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.1■□□□□ 0.33
Pdlim3O70209 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.1■□□□□ 0.33
Pdlim3O70209 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdlim3O70209 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdlim3O70209 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdlim3O70209 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.1■□□□□ 0.33
Pdlim3O70209 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.1■□□□□ 0.33
Pdlim3O70209 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdlim3O70209 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdlim3O70209 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pdlim3O70209 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdlim3O70209 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdlim3O70209 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdlim3O70209 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdlim3O70209 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdlim3O70209 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdlim3O70209 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdlim3O70209 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.09■□□□□ 0.33
Pdlim3O70209 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pdlim3O70209 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdlim3O70209 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pdlim3O70209 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
Pdlim3O70209 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Pdlim3O70209 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Pdlim3O70209 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pdlim3O70209 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pdlim3O70209 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.08■□□□□ 0.33
Pdlim3O70209 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pdlim3O70209 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pdlim3O70209 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Pdlim3O70209 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pdlim3O70209 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pdlim3O70209 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pdlim3O70209 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pdlim3O70209 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Pdlim3O70209 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pdlim3O70209 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Pdlim3O70209 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Pdlim3O70209 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pdlim3O70209 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pdlim3O70209 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pdlim3O70209 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pdlim3O70209 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim3O70209 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.07■□□□□ 0.32
Pdlim3O70209 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Pdlim3O70209 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Pdlim3O70209 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim3O70209 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim3O70209 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim3O70209 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim3O70209 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim3O70209 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pdlim3O70209 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
Pdlim3O70209 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.06■□□□□ 0.32
Pdlim3O70209 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pdlim3O70209 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Pdlim3O70209 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pdlim3O70209 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pdlim3O70209 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pdlim3O70209 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pdlim3O70209 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pdlim3O70209 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pdlim3O70209 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pdlim3O70209 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.06■□□□□ 0.32
Pdlim3O70209 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pdlim3O70209 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Pdlim3O70209 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Pdlim3O70209 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pdlim3O70209 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.05■□□□□ 0.32
Pdlim3O70209 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim3O70209 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.05■□□□□ 0.32
Pdlim3O70209 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim3O70209 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim3O70209 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim3O70209 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim3O70209 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim3O70209 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim3O70209 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim3O70209 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim3O70209 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim3O70209 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim3O70209 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim3O70209 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim3O70209 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim3O70209 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdlim3O70209 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pdlim3O70209 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms