Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Mmp8O70138 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Mmp8O70138 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Mmp8O70138 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Mmp8O70138 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Mmp8O70138 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Mmp8O70138 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Mmp8O70138 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Mmp8O70138 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Mmp8O70138 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC23.15■■□□□ 1.3
Mmp8O70138 Gm42569-201ENSMUST00000200539 472 ntBASIC23.15■■□□□ 1.3
Mmp8O70138 Gm7514-201ENSMUST00000209475 934 ntBASIC23.15■■□□□ 1.3
Mmp8O70138 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Mmp8O70138 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Mmp8O70138 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Mmp8O70138 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Mmp8O70138 Gm5784-201ENSMUST00000179344 2478 ntBASIC23.15■■□□□ 1.3
Mmp8O70138 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Mmp8O70138 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Mmp8O70138 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Mmp8O70138 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Mmp8O70138 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Mmp8O70138 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Mmp8O70138 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC23.14■■□□□ 1.29
Mmp8O70138 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Mmp8O70138 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
Mmp8O70138 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
Mmp8O70138 Rncr4-201ENSMUST00000194541 2234 ntBASIC23.13■■□□□ 1.29
Mmp8O70138 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Mmp8O70138 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Mmp8O70138 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Mmp8O70138 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Mmp8O70138 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC23.13■■□□□ 1.29
Mmp8O70138 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Mmp8O70138 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Mmp8O70138 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Mmp8O70138 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Mmp8O70138 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Mmp8O70138 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Mmp8O70138 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Mmp8O70138 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Mmp8O70138 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Mmp8O70138 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Mmp8O70138 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Mmp8O70138 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Mmp8O70138 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Mmp8O70138 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Mmp8O70138 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Mmp8O70138 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Mmp8O70138 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC23.12■■□□□ 1.29
Mmp8O70138 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Mmp8O70138 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Mmp8O70138 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Mmp8O70138 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC23.11■■□□□ 1.29
Mmp8O70138 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Mmp8O70138 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Mmp8O70138 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Mmp8O70138 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Mmp8O70138 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Mmp8O70138 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Mmp8O70138 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Mmp8O70138 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Mmp8O70138 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Mmp8O70138 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Mmp8O70138 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Mmp8O70138 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Mmp8O70138 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Mmp8O70138 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Mmp8O70138 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Mmp8O70138 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC23.1■■□□□ 1.29
Mmp8O70138 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC23.1■■□□□ 1.29
Mmp8O70138 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Mmp8O70138 Gm6420-201ENSMUST00000193885 723 ntBASIC23.1■■□□□ 1.29
Mmp8O70138 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
Mmp8O70138 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC23.1■■□□□ 1.29
Mmp8O70138 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Mmp8O70138 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Mmp8O70138 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Mmp8O70138 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Mmp8O70138 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Mmp8O70138 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Mmp8O70138 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Mmp8O70138 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Mmp8O70138 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Mmp8O70138 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Mmp8O70138 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Mmp8O70138 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Mmp8O70138 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Mmp8O70138 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Mmp8O70138 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Mmp8O70138 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Mmp8O70138 Gm27405-201ENSMUST00000184201 112 ntBASIC23.08■■□□□ 1.29
Mmp8O70138 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Mmp8O70138 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
Mmp8O70138 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Mmp8O70138 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Mmp8O70138 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.28
Mmp8O70138 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Mmp8O70138 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Mmp8O70138 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC23.07■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms