Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.96■□□□□ 0.79
Pja1O55176 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pja1O55176 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pja1O55176 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pja1O55176 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pja1O55176 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
Pja1O55176 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pja1O55176 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pja1O55176 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Pja1O55176 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pja1O55176 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pja1O55176 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pja1O55176 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pja1O55176 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pja1O55176 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.95■□□□□ 0.78
Pja1O55176 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.95■□□□□ 0.78
Pja1O55176 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pja1O55176 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.95■□□□□ 0.78
Pja1O55176 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pja1O55176 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pja1O55176 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.95■□□□□ 0.78
Pja1O55176 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Pja1O55176 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Pja1O55176 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Pja1O55176 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.94■□□□□ 0.78
Pja1O55176 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pja1O55176 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pja1O55176 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.94■□□□□ 0.78
Pja1O55176 Gm43137-201ENSMUST00000198052 594 ntBASIC19.94■□□□□ 0.78
Pja1O55176 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pja1O55176 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pja1O55176 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pja1O55176 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pja1O55176 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pja1O55176 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.94■□□□□ 0.78
Pja1O55176 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pja1O55176 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pja1O55176 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pja1O55176 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pja1O55176 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pja1O55176 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pja1O55176 Grk6-206ENSMUST00000224995 2971 ntBASIC19.93■□□□□ 0.78
Pja1O55176 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pja1O55176 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pja1O55176 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pja1O55176 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Pja1O55176 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.93■□□□□ 0.78
Pja1O55176 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.93■□□□□ 0.78
Pja1O55176 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Pja1O55176 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.93■□□□□ 0.78
Pja1O55176 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.93■□□□□ 0.78
Pja1O55176 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pja1O55176 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pja1O55176 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Pja1O55176 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pja1O55176 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Pja1O55176 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pja1O55176 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
Pja1O55176 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pja1O55176 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pja1O55176 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pja1O55176 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pja1O55176 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Pja1O55176 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pja1O55176 Gm9847-201ENSMUST00000052528 599 ntBASIC19.92■□□□□ 0.78
Pja1O55176 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pja1O55176 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pja1O55176 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pja1O55176 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pja1O55176 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.91■□□□□ 0.78
Pja1O55176 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Pja1O55176 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pja1O55176 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Pja1O55176 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pja1O55176 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Pja1O55176 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pja1O55176 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.91■□□□□ 0.78
Pja1O55176 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pja1O55176 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pja1O55176 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.9■□□□□ 0.78
Pja1O55176 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pja1O55176 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Pja1O55176 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pja1O55176 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pja1O55176 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pja1O55176 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pja1O55176 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pja1O55176 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pja1O55176 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Pja1O55176 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pja1O55176 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pja1O55176 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pja1O55176 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pja1O55176 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
Pja1O55176 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pja1O55176 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pja1O55176 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pja1O55176 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pja1O55176 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.89■□□□□ 0.77
Pja1O55176 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms