Protein–RNA interactions for Protein: O55134

Pcdh12, Protocadherin-12, mousemouse

Predictions only

Length 1,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh12O55134 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh12O55134 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh12O55134 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh12O55134 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.11■□□□□ 0.33
Pcdh12O55134 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh12O55134 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh12O55134 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh12O55134 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh12O55134 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdh12O55134 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.1■□□□□ 0.33
Pcdh12O55134 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.1■□□□□ 0.33
Pcdh12O55134 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.1■□□□□ 0.33
Pcdh12O55134 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdh12O55134 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Pcdh12O55134 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
Pcdh12O55134 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh12O55134 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh12O55134 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh12O55134 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh12O55134 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh12O55134 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh12O55134 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Pcdh12O55134 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Pcdh12O55134 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.09■□□□□ 0.33
Pcdh12O55134 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh12O55134 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh12O55134 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh12O55134 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh12O55134 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh12O55134 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh12O55134 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.08■□□□□ 0.33
Pcdh12O55134 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdh12O55134 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdh12O55134 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdh12O55134 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdh12O55134 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdh12O55134 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.08■□□□□ 0.32
Pcdh12O55134 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh12O55134 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh12O55134 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh12O55134 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh12O55134 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh12O55134 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh12O55134 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh12O55134 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh12O55134 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh12O55134 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.07■□□□□ 0.32
Pcdh12O55134 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh12O55134 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh12O55134 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.07■□□□□ 0.32
Pcdh12O55134 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.07■□□□□ 0.32
Pcdh12O55134 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.07■□□□□ 0.32
Pcdh12O55134 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.07■□□□□ 0.32
Pcdh12O55134 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh12O55134 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh12O55134 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh12O55134 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh12O55134 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.06■□□□□ 0.32
Pcdh12O55134 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh12O55134 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Pcdh12O55134 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh12O55134 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.06■□□□□ 0.32
Pcdh12O55134 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh12O55134 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh12O55134 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.06■□□□□ 0.32
Pcdh12O55134 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Pcdh12O55134 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh12O55134 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh12O55134 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Pcdh12O55134 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh12O55134 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh12O55134 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh12O55134 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh12O55134 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh12O55134 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pcdh12O55134 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh12O55134 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh12O55134 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh12O55134 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.05■□□□□ 0.32
Pcdh12O55134 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh12O55134 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Pcdh12O55134 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh12O55134 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh12O55134 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.05■□□□□ 0.32
Pcdh12O55134 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh12O55134 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh12O55134 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh12O55134 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Pcdh12O55134 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh12O55134 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh12O55134 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh12O55134 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.05■□□□□ 0.32
Pcdh12O55134 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pcdh12O55134 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh12O55134 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh12O55134 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh12O55134 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Pcdh12O55134 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Pcdh12O55134 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh12O55134 Gm42642-201ENSMUST00000200683 355 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms